Detail Information

Basic Information:


  VIRBase ID:  

VHID00276925

  Virus:  

Human gammaherpesvirus 4 (Epstein-Barr virus, EPV)

  Host:  

Homo sapiens

  Confidence Score:  

0.9526

  Interaction Type:  

Virus-Host interaction

Interactor Information:


Interactor1 Interactor2
Symbol EBER1 IGKV1D-42
miRBase
Accession/Entrez ID
EBER1 28892
Organism Human gammaherpesvirus 4 (Epstein-Barr virus, EPV) Homo sapiens
Category lncRNA protein
Alias - IGKV1D42//L22

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate EBER1

Interaction Network (The top 100 interactions):


Interactor1: EBER1
Interactor2: IGKV1D-42

Evidence Support:


Strong-Evidence IP//ISH//Western blot
Support Database ViRBase

References:


[1]PMID 8159770 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line BJAB cells//BJAB-B1 cells//HR1K cells//Raji cells Interactor2 expression None
Description The nucleoplasmic location of the EBER1 RNP suggests that the formation of EBER1-L22 complexes in vivo could occur either prior to L22 assembly into the ribosome or by removal of L22 from preexisting ribosomes and subsequent sequestration in the nucleus.
[2]PMID 20719877 Target region None
Source ViRBase Interactor1 expression None
Tissue or cell line BJAB cells//BJAB-B1 cells//HR1K cells//Raji cells Interactor2 expression None
Description EBER1 also forms an RNP with ribosomal protein L22; indeed, three molecules of ribosomal protein L22 can bind to EBER1 through three of its stem-loops (Fok et al. 2006a) (Fig.1B). The binding of L22 to EBER1 causes L22 to appear in the nucleoplasm, as well as its normal location in the nucleolus and cytoplasm (Toczyski et al. 1994).

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