Detail Information

Basic Information:


  VIRBase ID:  

VHID00276896

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:           LY75-CD302:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL69 LY75-CD302
miRBase
Accession/Entrez ID		 MIMAT0029123 100526664
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - CD205//CLEC13B//DEC-205//gp200-MR6//Ly-75//LY75

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR LY75-CD302
chr2:160659590(-) A-I      intronic
chr2:160659585(-) A-I      intronic
chr2:160659187(-) A-I      intronic
chr2:160659184(-) A-I      intronic
chr2:160659175(-) A-I      intronic
chr2:160625879(-) A-I      3'UTR
chr2:160659614(-) A-I      intronic
chr2:160625881(-) A-I      3'UTR
chr2:160695475(-) A-I      intronic
chr2:160704788(-) A-I      intronic
chr2:160659556(-) A-I      intronic
chr2:160695445(-) A-I      intronic
chr2:160659174(-) A-I      intronic
chr2:160659597(-) A-I      intronic
chr2:160659593(-) A-I      intronic
chr2:160659591(-) A-I      intronic
chr2:160696495(-) A-I      intronic
chr2:160696511(-) A-I      intronic
chr2:160696839(-) A-I      intronic
chr2:160696865(-) A-I      intronic
chr2:160696948(-) A-I      intronic
chr2:160697069(-) A-I      intronic
chr2:160726837(-) A-I      intronic
chr2:160727051(-) A-I      intronic
chr2:160728263(-) A-I      intronic
chr2:160744869(-) A-I      intronic
chr2:160671640(-) A-I      intronic
chr2:160695471(-) A-I      intronic
chr2:160629651(-) A-I      intronic
chr2:160629804(-) A-I      intronic
chr2:160633680(-) A-I      intronic
chr2:160645712(-) A-I      intronic
chr2:160645731(-) A-I      intronic
chr2:160645732(-) A-I      intronic
chr2:160645739(-) A-I      intronic
chr2:160657851(-) A-I      intronic
chr2:160658985(-) A-I      intronic
chr2:160659035(-) A-I      intronic
chr2:160659042(-) A-I      intronic
chr2:160659208(-) A-I      intronic
chr2:160659496(-) A-I      intronic
chr2:160659594(-) A-I      intronic
chr2:160666580(-) A-I      intronic
chr2:160670901(-) A-I      intronic
chr2:160670941(-) A-I      intronic
chr2:160671018(-) A-I      intronic
chr2:160677520(-) A-I      intronic
chr2:160677870(-) A-I      intronic
chr2:160677897(-) A-I      intronic
chr2:160677935(-) A-I      intronic
chr2:160678015(-) A-I      intronic
chr2:160678044(-) A-I      intronic
chr2:160695415(-) A-I      intronic
chr2:160695428(-) A-I      intronic
chr2:160695429(-) A-I      intronic
chr2:160726894(-) A-I      intronic
chr2:160696188(-) A-I      intronic
chr2:160696251(-) A-I      intronic
chr2:160696312(-) A-I      intronic
chr2:160696313(-) A-I      intronic
chr2:160696337(-) A-I      intronic
chr2:160696354(-) A-I      intronic
chr2:160696481(-) A-I      intronic
chr2:160625897(-) A-I      3'UTR
chr2:160625909(-) A-I      3'UTR
chr2:160625911(-) A-I      3'UTR
chr2:160625924(-) A-I      3'UTR
chr2:160625928(-) A-I      3'UTR
chr2:160625971(-) A-I      3'UTR
chr2:160626015(-) A-I      3'UTR
chr2:160626072(-) A-I      3'UTR
chr2:160626069(-) A-I      3'UTR
chr2:160626011(-) A-I      3'UTR
chr2:160626068(-) A-I      3'UTR
chr2:160625997(-) A-I      3'UTR
chr2:160625888(-) A-I      3'UTR
chr2:160629700(-) A-I      intronic
chr2:160659244(-) A-I      intronic
chr2:160696916(-) A-I      intronic
chr2:160726926(-) A-I      intronic
chr2:160696872(-) A-I      intronic
chr2:160635492(-) A-I      intronic
chr2:160651479(-) A-I      intronic
chr2:160696460(-) A-I      intronic
chr2:160696470(-) A-I      intronic
chr2:160696325(-) A-I      intronic
chr2:160697000(-) A-I      intronic
chr2:160635249(-) A-I      intronic
chr2:160696172(-) A-I      intronic
chr2:160633354(-) A-I      intronic
chr2:160726867(-) A-I      intronic
chr2:160658020(-) A-I      intronic
chr2:160629798(-) A-I      intronic
chr2:160727118(-) A-I      intronic
chr2:160696395(-) A-I      intronic
chr2:160727253(-) A-I      intronic
chr2:160659047(-) A-I      intronic
chr2:160678005(-) A-I      intronic
chr2:160671161(-) A-I      intronic
chr2:160629721(-) A-I      intronic
chr2:160658315(-) A-I      intronic
chr2:160695489(-) A-I      intronic
chr2:160695520(-) A-I      intronic
chr2:160702922(-) A-I      intronic
chr2:160726765(-) A-I      intronic
chr2:160642917(-) A-I      intronic
chr2:160695484(-) A-I      intronic
chr2:160697026(-) A-I      intronic
chr2:160745851(-) A-I      intronic
chr2:160726940(-) A-I      intronic
chr2:160695508(-) A-I      intronic
chr2:160636369(-) A-I      intronic
chr2:160677979(-) A-I      intronic
chr2:160697047(-) A-I      intronic
chr2:160625936(-) A-I      3'UTR
chr2:160625969(-) A-I      3'UTR
chr2:160625951(-) A-I      3'UTR
chr2:160625950(-) A-I      3'UTR
chr2:160625988(-) A-I      3'UTR
chr2:160727268(-) A-I      intronic
chr2:160727222(-) A-I      intronic
chr2:160669014(-) A-I      intronic
chr2:160669197(-) A-I      intronic
chr2:160659712(-) A-I      intronic
chr2:160727287(-) A-I      intronic
chr2:160696305(-) A-I      intronic
chr2:160659070(-) A-I      intronic
chr2:160696983(-) A-I      intronic
chr2:160633355(-) A-I      intronic
chr2:160696152(-) A-I      intronic
chr2:160695403(-) A-I      intronic
chr2:160670982(-) A-I      intronic
chr2:160726876(-) A-I      intronic
chr2:160696910(-) A-I      intronic
chr2:160632507(-) A-I      intronic
chr2:160695579(-) A-I      intronic
chr2:160697067(-) A-I      intronic
chr2:160695486(-) A-I      intronic
chr2:160695485(-) A-I      intronic
chr2:160658316(-) A-I      intronic
chr2:160695404(-) A-I      intronic
chr2:160629756(-) A-I      intronic
chr2:160659582(-) A-I      intronic
chr2:160697077(-) A-I      intronic
chr2:160696111(-) A-I      intronic
chr2:160671044(-) A-I      intronic
chr2:160659022(-) A-I      intronic
chr2:160669120(-) A-I      intronic
chr2:160677518(-) A-I      intronic
chr2:160677624(-) A-I      intronic
chr2:160702864(-) A-I      intronic
chr2:160702977(-) A-I      intronic
chr2:160697061(-) A-I      intronic
chr2:160658465(-) A-I      intronic
chr2:160726875(-) A-I      intronic
chr2:160696114(-) A-I      intronic
chr2:160718500(-) A-I      intronic
chr2:160677544(-) A-I      intronic
chr2:160659541(-) A-I      intronic
chr2:160640964(-) A-I      intronic
chr2:160658345(-) A-I      intronic
chr2:160632437(-) A-I      intronic
chr2:160697076(-) A-I      intronic
chr2:160702806(-) A-I      intronic
chr2:160703015(-) A-I      intronic
chr2:160659670(-) A-I      intronic
chr2:160728232(-) A-I      intronic
chr2:160633679(-) A-I      intronic
chr2:160678070(-) A-I      intronic
chr2:160659665(-) A-I      intronic
chr2:160669127(-) A-I      intronic
chr2:160677530(-) A-I      intronic
chr2:160696417(-) A-I      intronic
chr2:160702929(-) A-I      intronic
chr2:160727250(-) A-I      intronic
chr2:160726840(-) A-I      intronic
chr2:160696441(-) A-I      intronic
chr2:160695500(-) A-I      intronic
chr2:160718684(-) A-I      intronic
chr2:160702792(-) A-I      intronic
chr2:160696353(-) A-I      intronic
chr2:160669061(-) A-I      intronic
chr2:160633662(-) A-I      intronic
chr2:160726759(-) A-I      intronic
chr2:160696258(-) A-I      intronic
chr2:160658277(-) A-I      intronic
chr2:160696430(-) A-I      intronic
chr2:160659638(-) A-I      intronic
chr2:160696351(-) A-I      intronic
chr2:160670993(-) A-I      intronic
chr2:160727154(-) A-I      intronic
chr2:160696132(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED LY75-CD302
chr2:160658275(-) A-G intron -    22484847
chr2:160658277(-) A-G intron -    22484847
chr2:160658315(-) A-G intron -    22484847
chr2:160658316(-) A-G intron -    22484847
chr2:160658345(-) A-G intron -    22484847
chr2:160659541(-) A-G intron -    22484847
chr2:160659665(-) A-G intron -    22484847
chr2:160659712(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LY75-CD302
chr2:160637478-160637479(-) m1A CDS       26863410
chr2:160734936-160734937(-) m6A CDS       27773535
chr2:160735171-160735172(-) m6A CDS       27773535
chr2:160735210-160735211(-) m6A CDS       27773535
chr2:160735220-160735221(-) m6A CDS       27773535
chr2:160735811-160735812(-) m6A CDS       27773535
chr2:160735844-160735845(-) m6A CDS       27773535
chr2:160755280-160755281(-) m6A CDS       -
chr2:160758941-160758942(-) m6A intron       27371828
chr2:160758952-160758953(-) m6A intron       27371828
chr2:160758981-160758982(-) m6A intron       27371828
chr2:160759151-160759152(-) m6A intron       28052920//27773535
chr2:160759164-160759165(-) m6A intron       28052920//27773535
chr2:160759205-160759206(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759211-160759212(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759219-160759220(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759231-160759232(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759250-160759251(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759262-160759263(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759279-160759280(-) m6A intron       25456834//24981863//28052920//27773535//27371828
chr2:160759325-160759326(-) m6A intron       25456834//27773535
chr2:160759340-160759341(-) m6A intron       25456834//27773535
chr2:160759430-160759431(-) m6A intron       -
chr2:160759548-160759549(-) m6A intron       -
chr2:160759585-160759586(-) m6A intron       -
chr2:160759956-160759957(-) m6A intron       -
chr2:160760008-160760009(-) m6A intron       -
chr2:160760020-160760021(-) m6A intron       -
chr2:160760089-160760090(-) m6A intron       -
chr2:160761186-160761187(-) m6A CDS       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LY75-CD302
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL69
Interactor2: LY75-CD302

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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