Basic Information:

  VIRBase ID:  

VHID00276895

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          MICA:  NM_001289152     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	MICA
miRBase Accession/Entrez ID	MIMAT0029123	100507436
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MIC-A//PERB11.1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MICA	chr6:31376765(+) A-I      intronic chr6:31376737(+) A-I      intronic chr6:31376723(+) A-I      intronic chr6:31376688(+) A-I      intronic chr6:31376582(+) A-I      intronic chr6:31376581(+) A-I      intronic chr6:31383250(+) A-I      3'UTR chr6:31383331(+) A-I      3'UTR chr6:31383615(+) A-I      3'UTR chr6:31383320(+) A-I      3'UTR chr6:31383275(+) A-I      3'UTR chr6:31383276(+) A-I      3'UTR chr6:31369971(+) A-I      5'UTR chr6:31383273(+) A-I      3'UTR chr6:31383269(+) A-I      3'UTR chr6:31383172(+) A-I      3'UTR chr6:31369972(+) A-I      5'UTR chr6:31383186(+) A-I      3'UTR chr6:31383621(+) A-I      3'UTR chr6:31369980(+) A-I      5'UTR chr6:31383652(+) A-I      3'UTR chr6:31383724(+) A-I      3'UTR chr6:31369937(+) A-I      5'UTR chr6:31369946(+) A-I      5'UTR chr6:31383345(+) A-I      3'UTR chr6:31383354(+) A-I      3'UTR chr6:31383693(+) A-I      3'UTR chr6:31383589(+) A-I      3'UTR chr6:31383584(+) A-I      3'UTR chr6:31383549(+) A-I      3'UTR chr6:31383511(+) A-I      3'UTR chr6:31383475(+) A-I      3'UTR chr6:31383471(+) A-I      3'UTR chr6:31383455(+) A-I      3'UTR chr6:31383535(+) A-I      3'UTR chr6:31375196(+) A-I      intronic chr6:31375034(+) A-I      intronic chr6:31383694(+) A-I      3'UTR chr6:31383571(+) A-I      3'UTR chr6:31383684(+) A-I      3'UTR chr6:31383501(+) A-I      3'UTR chr6:31383180(+) A-I      3'UTR chr6:31383606(+) A-I      3'UTR chr6:31383561(+) A-I      3'UTR chr6:31383314(+) A-I      3'UTR chr6:31383597(+) A-I      3'UTR chr6:31383181(+) A-I      3'UTR chr6:31383709(+) A-I      3'UTR chr6:31383340(+) A-I      3'UTR chr6:31383632(+) A-I      3'UTR chr6:31383463(+) A-I      3'UTR chr6:31383712(+) A-I      3'UTR chr6:31383235(+) A-I      3'UTR chr6:31383324(+) A-I      3'UTR chr6:31383575(+) A-I      3'UTR chr6:31383532(+) A-I      3'UTR chr6:31383617(+) A-I      3'UTR chr6:31383355(+) A-I      3'UTR chr6:31383344(+) A-I      3'UTR chr6:31383328(+) A-I      3'UTR chr6:31383158(+) A-I      3'UTR chr6:31383384(+) A-I      3'UTR chr6:31383379(+) A-I      3'UTR chr6:31383573(+) A-I      3'UTR chr6:31383624(+) A-I      3'UTR chr6:31383278(+) A-I      3'UTR chr6:31383558(+) A-I      3'UTR chr6:31376549(+) A-I      intronic chr6:31375044(+) A-I      intronic chr6:31376635(+) A-I      intronic chr6:31375062(+) A-I      intronic chr6:31376525(+) A-I      intronic chr6:31375187(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MICA	chr6:31367643-31367644(+) m6A 5'UTR       - chr6:31367715-31367716(+) m6A 5'UTR       - chr6:31367895-31367896(+) m6A 5'UTR       - chr6:31367963-31367964(+) m6A 5'UTR       - chr6:31368032-31368033(+) m6A 5'UTR       - chr6:31368052-31368053(+) m6A 5'UTR       - chr6:31368114-31368115(+) m6A 5'UTR       - chr6:31378458-31378459(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378489-31378490(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378496-31378497(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378504-31378505(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378511-31378512(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378532-31378533(+) m6A 5'UTR//CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378562-31378563(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr6:31378893-31378894(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31378953-31378954(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31378961-31378962(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31378973-31378974(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31379000-31379001(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31379048-31379049(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31379054-31379055(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22608085 chr6:31379079-31379080(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr6:31379092-31379093(+) m6A CDS//intron       24981863 chr6:31379132-31379133(+) m6A CDS//intron       - chr6:31382916-31382917(+) m6A 3'UTR       24284625 chr6:31383005-31383006(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MICA	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: MICA

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg