Basic Information:

  VIRBase ID:  

VHID00276846

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          ZNF704:  NM_001033723     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	ZNF704
miRBase Accession/Entrez ID	MIMAT0029123	619279
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Gig1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF704	chr8:81672119(-) A-I      intronic chr8:81708988(-) A-I      intronic chr8:81707914(-) A-I      intronic chr8:81672087(-) A-I      intronic chr8:81664104(-) A-I      intronic chr8:81710520(-) A-I      intronic chr8:81672855(-) A-I      intronic chr8:81672244(-) A-I      intronic chr8:81608675(-) A-I      intronic chr8:81765477(-) A-I      intronic chr8:81672123(-) A-I      intronic chr8:81686524(-) A-I      intronic chr8:81686528(-) A-I      intronic chr8:81686532(-) A-I      intronic chr8:81686551(-) A-I      intronic chr8:81664113(-) A-I      intronic chr8:81660015(-) A-I      intronic chr8:81686569(-) A-I      intronic chr8:81608688(-) A-I      intronic chr8:81721450(-) A-I      intronic chr8:81576065(-) A-I      intronic chr8:81710763(-) A-I      intronic chr8:81710526(-) A-I      intronic chr8:81710525(-) A-I      intronic chr8:81709039(-) A-I      intronic chr8:81709028(-) A-I      intronic chr8:81707870(-) A-I      intronic chr8:81569723(-) A-I      intronic chr8:81672153(-) A-I      intronic chr8:81759216(-) A-I      intronic chr8:81710762(-) A-I      intronic chr8:81710765(-) A-I      intronic chr8:81708974(-) A-I      intronic chr8:81721363(-) A-I      intronic chr8:81721334(-) A-I      intronic chr8:81558667(-) A-I      intronic chr8:81710563(-) A-I      intronic chr8:81603200(-) A-I      intronic chr8:81544448(-) A-I      3'UTR chr8:81663988(-) A-I      intronic chr8:81710558(-) A-I      intronic chr8:81668170(-) A-I      intronic chr8:81721325(-) A-I      intronic chr8:81664879(-) A-I      intronic chr8:81576537(-) A-I      intronic chr8:81576538(-) A-I      intronic chr8:81708971(-) A-I      intronic chr8:81672107(-) A-I      intronic chr8:81691587(-) A-I      intronic chr8:81575397(-) A-I      intronic chr8:81759225(-) A-I      intronic chr8:81774918(-) A-I      intronic chr8:81576093(-) A-I      intronic chr8:81754122(-) A-I      intronic chr8:81621652(-) A-I      intronic chr8:81733135(-) A-I      intronic chr8:81710708(-) A-I      intronic chr8:81774964(-) A-I      intronic chr8:81710596(-) A-I      intronic chr8:81576167(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF704	chr8:81540801-81540802(-) m6A 3'UTR       27773535//22608085 chr8:81540812-81540813(-) m6A 3'UTR       24981863//27773535//22608085 chr8:81540819-81540820(-) m6A 3'UTR       24981863//27773535//22608085 chr8:81540830-81540831(-) m6A 3'UTR       24981863//27773535//22608085 chr8:81540947-81540948(-) m6A 3'UTR       22608085 chr8:81547466-81547467(-) m6A 3'UTR       27773535 chr8:81547496-81547497(-) m6A 3'UTR       27773535 chr8:81547526-81547527(-) m6A 3'UTR       27773535 chr8:81547534-81547535(-) m6A 3'UTR       27773535 chr8:81547583-81547584(-) m6A 3'UTR       27773535 chr8:81547611-81547612(-) m6A 3'UTR       27773535 chr8:81547620-81547621(-) m6A 3'UTR       27773535 chr8:81547625-81547626(-) m6A 3'UTR       27773535 chr8:81548663-81548664(-) m6A 3'UTR       27773535//22608085 chr8:81548768-81548769(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81548806-81548807(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81548850-81548851(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81548967-81548968(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81549003-81549004(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81549077-81549078(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:81549087-81549088(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:81549097-81549098(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr8:81549101-81549102(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr8:81549262-81549263(-) m6A 3'UTR       24209618//27773535//22608085 chr8:81549321-81549322(-) m6A 3'UTR       27773535//22608085 chr8:81549409-81549410(-) m6A 3'UTR       24209618//27773535//22608085 chr8:81549423-81549424(-) m6A 3'UTR       24209618//27773535//22608085 chr8:81549441-81549442(-) m6A 3'UTR       24209618//27773535//22608085 chr8:81549461-81549462(-) m6A 3'UTR       24209618//27773535//22608085 chr8:81549504-81549505(-) m6A 3'UTR       24209618//22608085 chr8:81549513-81549514(-) m6A 3'UTR       24209618//22608085 chr8:81550658-81550659(-) m6A 3'UTR       22608085 chr8:81550686-81550687(-) m6A 3'UTR       25456834//22608085 chr8:81550695-81550696(-) m6A 3'UTR       25456834//22608085 chr8:81550740-81550741(-) m6A 3'UTR       25456834//22608085 chr8:81550967-81550968(-) m6A 3'UTR//exon       22608085 chr8:81550982-81550983(-) m6A 3'UTR//exon       22608085 chr8:81550988-81550989(-) m6A 3'UTR//exon       22608085 chr8:81551011-81551012(-) m6A 3'UTR//exon       22608085 chr8:81552081-81552082(-) m6A 3'UTR//intron       27773535 chr8:81552088-81552089(-) m6A 3'UTR//intron       27773535 chr8:81552415-81552416(-) m6A 3'UTR//intron       27773535 chr8:81552443-81552444(-) m6A 3'UTR//intron       27773535//22608085 chr8:81552520-81552521(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81552578-81552579(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81552602-81552603(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:81552609-81552610(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr8:81552644-81552645(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81552874-81552875(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81552923-81552924(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81552959-81552960(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr8:81553002-81553003(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553074-81553075(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553196-81553197(-) m6A 3'UTR       24981863//27773535//22608085 chr8:81553287-81553288(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553304-81553305(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553311-81553312(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553318-81553319(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553392-81553393(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr8:81553450-81553451(-) m6A 3'UTR       24284625//24981863//22608085 chr8:81553473-81553474(-) m6A 3'UTR       24284625//24981863//22608085 chr8:81553506-81553507(-) m6A 3'UTR       24284625//24981863//22608085 chr8:81553596-81553597(-) m6A 3'UTR       25456834//24981863//22608085 chr8:81553655-81553656(-) m6A CDS       24981863 chr8:81553661-81553662(-) m6A CDS       24981863 chr8:81555322-81555323(-) m6A CDS       27773535 chr8:81570987-81570988(-) m6A exon//intron       27773535 chr8:81577123-81577124(-) m6A CDS//exon       27773535 chr8:81577144-81577145(-) m6A CDS//exon       27773535 chr8:81577150-81577151(-) m6A CDS//exon       27773535 chr8:81577245-81577246(-) m6A CDS//exon       27773535 chr8:81577278-81577279(-) m6A CDS//exon       24981863//27773535 chr8:81577305-81577306(-) m6A CDS//exon       24981863 chr8:81582750-81582751(-) m6A CDS//exon       24981863 chr8:81582760-81582761(-) m6A CDS//exon       24981863 chr8:81582800-81582801(-) m6A CDS//exon       24981863 chr8:81733680-81733681(-) m6A CDS       24284625//27773535//22608085 chr8:81733722-81733723(-) m6A CDS       24284625//27773535//22608085 chr8:81733729-81733730(-) m6A CDS       24284625//27773535//22608085 chr8:81733803-81733804(-) m6A CDS       24209618//24981863//27773535//22608085 chr8:81785823-81785824(-) m6A 5'UTR//intron       24209618//25456834//24981863//27773536//22608085 chr8:81786811-81786812(-) m6A 5'UTR       24209618//25456834//24981863//27773536 chr8:81786821-81786822(-) m6A 5'UTR       24209618//25456834//24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF704	Cytosol HCC cell line (HepG2)     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: ZNF704

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg