Basic Information:

  VIRBase ID:  

VHID00276792

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          TMEM200B:  NM_001003682     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	TMEM200B
miRBase Accession/Entrez ID	MIMAT0029123	399474
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	TTMB

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM200B	chr1:29446272-29446273(-) m6A 3'UTR       25456834 chr1:29446448-29446449(-) m6A 3'UTR       27773535 chr1:29446455-29446456(-) m6A 3'UTR       27773535 chr1:29446488-29446489(-) m6A 3'UTR       27773535 chr1:29446500-29446501(-) m6A 3'UTR       27773535 chr1:29446505-29446506(-) m6A 3'UTR       27773535 chr1:29446908-29446909(-) m6A 3'UTR       25456834//22608085 chr1:29446920-29446921(-) m6A 3'UTR       25456834//22608085 chr1:29446946-29446947(-) m6A 3'UTR       25456834//22608085 chr1:29446959-29446960(-) m6A 3'UTR       25456834//22608085 chr1:29447048-29447049(-) m6A 3'UTR       25456834//27773535//22608085 chr1:29447080-29447081(-) m6A 3'UTR       24209618//25456834 chr1:29447183-29447184(-) m6A 3'UTR       25456834//24981863//22608085 chr1:29447355-29447356(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr1:29447363-29447364(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr1:29447377-29447378(-) m6A 3'UTR       25456834//24981863//22608085 chr1:29447404-29447405(-) m6A 3'UTR       25456834//24981863//22608085 chr1:29447435-29447436(-) m6A CDS       25456834//24981863//22575960//22608085 chr1:29447480-29447481(-) m6A CDS       25456834//24981863//22575960//22608085 chr1:29447510-29447511(-) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:29447572-29447573(-) m6A CDS       25456834//24981863//22608085 chr1:29447619-29447620(-) m6A CDS       25456834//24981863//22608085 chr1:29447771-29447772(-) m6A CDS       25456834 chr1:29447843-29447844(-) m6A CDS       25456834//24981863 chr1:29447918-29447919(-) m6A CDS       25456834//24981863//27773536 chr1:29447924-29447925(-) m6A CDS       25456834//24981863//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM200B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: TMEM200B

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg