Basic Information:

  VIRBase ID:  

VHID00275498

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          PCBP4:  NM_020418     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	PCBP4
miRBase Accession/Entrez ID	MIMAT0029123	57060
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CBP//LIP4//MCG10

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PCBP4	chr3:51991527-51991528(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr3:51991621-51991622(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085 chr3:51991806-51991807(-) m6A 3'UTR//exon       27773535 chr3:51991999-51992000(-) m6A 3'UTR//exon       24981863//27371828 chr3:51992043-51992044(-) m6A 3'UTR//exon       24981863//27773535//27371828 chr3:51992892-51992893(-) m6A 3'UTR//CDS//exon       27773535 chr3:51994007-51994008(-) m6A CDS//exon//intron       27773535 chr3:51994720-51994721(-) m6A exon//intron       27773535//27371828 chr3:51994805-51994806(-) m6A exon//intron       - chr3:51994904-51994905(-) m6A CDS//exon       24284625//24209618//27773535//27371828 chr3:51995235-51995236(-) m6A CDS//exon       24209618//25456834//27773535//27371828//27773536 chr3:51995297-51995298(-) m6A 5'UTR//exon//intron       24209618//25456834//27371828//27773536 chr3:51995344-51995345(-) m6A exon//intron       24209618//27371828 chr3:51995360-51995361(-) m6A exon//intron       24209618//27371828 chr3:51996003-51996004(-) m6A 5'UTR//intron       24209618//27371828 chr3:51996058-51996059(-) m6A 5'UTR//intron       24209618//24981863 chr3:51996071-51996072(-) m6A 5'UTR//intron       24209618//24981863 chr3:51996885-51996886(-) m6A 5'UTR//exon//intron       24209618 chr3:52001354-52001355(-) m6A 5'UTR//exon//intron       24209618 chr3:52001398-52001399(-) m6A 5'UTR//exon//intron       24209618//27371828 chr3:52001408-52001409(-) m6A 5'UTR//exon//intron       24209618//27371828 chr3:52001467-52001468(-) m6A 5'UTR//intron       24209618 chr3:52002191-52002192(-) m6A 5'UTR//intron       24209618 chr3:52002530-52002531(-) m6A intron       27773535 chr3:52002735-52002736(-) m6A intron       24284625 chr3:52002932-52002933(-) m6A intron       27773535 chr3:52003216-52003217(-) m6A intron       27773535 chr3:52003234-52003235(-) m6A intron       27773535 chr3:52003261-52003262(-) m6A intron       27773535 chr3:52003463-52003464(-) m6A intron       24284625 chr3:52003496-52003497(-) m6A intron       24284625 chr3:52003575-52003576(-) m6A intron       - chr3:52003589-52003590(-) m6A intron       - chr3:52003595-52003596(-) m6A intron       - chr3:52005720-52005721(-) m6A intron       24284625//25456834//24981863//27773536//22575960 chr3:52005771-52005772(-) m6A intron       24284625//25456834//24981863//22575960 chr3:52005804-52005805(-) m6A intron       24284625//24981863//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PCBP4	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: PCBP4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg