Detail Information

Basic Information:


  VIRBase ID:  

VHID00274928

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:           RIMBP2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL69 RIMBP2
miRBase
Accession/Entrez ID		 MIMAT0029123 23504
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - PPP1R133//RBP2//RIM-BP2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RIMBP2
chr12:130913475(-) A-I      intronic
chr12:130984846(-) A-I      intronic
chr12:130913453(-) A-I      intronic
chr12:130965242(-) A-I      intronic
chr12:130977966(-) A-I      intronic
chr12:130977889(-) A-I      intronic
chr12:130977997(-) A-I      intronic
chr12:130977974(-) A-I      intronic
chr12:130978042(-) A-I      intronic
chr12:130977949(-) A-I      intronic
chr12:130978028(-) A-I      intronic
chr12:130977952(-) A-I      intronic
chr12:130977998(-) A-I      intronic
chr12:130977449(-) A-I      intronic
chr12:130913525(-) A-I      intronic
chr12:130913520(-) A-I      intronic
chr12:130984965(-) A-I      intronic
chr12:130977454(-) A-I      intronic
chr12:130977457(-) A-I      intronic
chr12:130977490(-) A-I      intronic
chr12:130977599(-) A-I      intronic
chr12:130979062(-) A-I      intronic
chr12:130977667(-) A-I      intronic
chr12:130978024(-) A-I      intronic
chr12:130979018(-) A-I      intronic
chr12:130915449(-) A-I      intronic
chr12:130977922(-) A-I      intronic
chr12:130974586(-) A-I      intronic
chr12:130977956(-) A-I      intronic
chr12:130977957(-) A-I      intronic
chr12:130965339(-) A-I      intronic
chr12:130913640(-) A-I      intronic
chr12:130978061(-) A-I      intronic
chr12:130978102(-) A-I      intronic
chr12:130978053(-) A-I      intronic
chr12:130977620(-) A-I      intronic
chr12:130980869(-) A-I      intronic
chr12:130945630(-) A-I      intronic
chr12:130911078(-) A-I      intronic
chr12:130918353(-) A-I      intronic
chr12:130980796(-) A-I      intronic
chr12:130945626(-) A-I      intronic
chr12:130977564(-) A-I      intronic
chr12:130938451(-) A-I      intronic
chr12:130978133(-) A-I      intronic
chr12:130983840(-) A-I      intronic
chr12:130979027(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RIMBP2
chr12:130911078(-) A-G intron -    22484847
chr12:130977490(-) A-G intron -    22484847
chr12:130977599(-) A-G intron -    22484847
chr12:130977667(-) A-G intron -    22484847
chr12:130977922(-) A-G intron -    22484847
chr12:130977956(-) A-G intron -    22484847
chr12:130977957(-) A-G intron -    22484847
chr12:130978024(-) A-G intron -    22484847
chr12:130978053(-) A-G intron -    22484847
chr12:130978061(-) A-G intron -    22484847
chr12:130978102(-) A-G intron -    22484847
chr12:130978133(-) A-G intron -    22484847
chr12:130979018(-) A-G intron -    22484847
chr12:130979027(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RIMBP2
chr12:130921659-130921660(-) m6A CDS       25456834
chr12:130921717-130921718(-) m6A CDS       25456834
chr12:130921745-130921746(-) m6A CDS       25456834
chr12:130921807-130921808(-) m6A CDS       -
chr12:130926646-130926647(-) m6A CDS       25456834
chr12:130926797-130926798(-) m6A CDS       25456834//24981863
chr12:130926817-130926818(-) m6A CDS       25456834//24981863
chr12:130926827-130926828(-) m6A CDS       25456834//24981863
chr12:130926835-130926836(-) m6A CDS       25456834//24981863
chr12:130926924-130926925(-) m6A CDS       24981863
chr12:130926961-130926962(-) m6A CDS       24981863
chr12:130926982-130926983(-) m6A CDS       24981863
chr12:130926995-130926996(-) m6A CDS       24981863
chr12:130927048-130927049(-) m6A CDS       -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL69
Interactor2: RIMBP2

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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