Basic Information:

  VIRBase ID:  

VHID00274784

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          EFR3B:  NM_001319099     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	EFR3B
miRBase Accession/Entrez ID	MIMAT0029123	22979
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA0953

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EFR3B	chr2:25316894(+) A-I      intronic chr2:25316898(+) A-I      intronic chr2:25316901(+) A-I      intronic chr2:25316900(+) A-I      intronic chr2:25271026(+) A-I      intronic chr2:25271051(+) A-I      intronic chr2:25280452(+) A-I      intronic chr2:25283626(+) A-I      intronic chr2:25283627(+) A-I      intronic chr2:25283632(+) A-I      intronic chr2:25317720(+) A-I      intronic chr2:25283722(+) A-I      intronic chr2:25327153(+) A-I      intronic chr2:25327144(+) A-I      intronic chr2:25318444(+) A-I      intronic chr2:25318442(+) A-I      intronic chr2:25290365(+) A-I      intronic chr2:25290359(+) A-I      intronic chr2:25317776(+) A-I      intronic chr2:25269115(+) A-I      intronic chr2:25269134(+) A-I      intronic chr2:25269139(+) A-I      intronic chr2:25269571(+) A-I      intronic chr2:25317744(+) A-I      intronic chr2:25269579(+) A-I      intronic chr2:25270548(+) A-I      intronic chr2:25270918(+) A-I      intronic chr2:25271014(+) A-I      intronic chr2:25331706(+) A-I      intronic chr2:25331709(+) A-I      intronic chr2:25331712(+) A-I      intronic chr2:25331715(+) A-I      intronic chr2:25339350(+) A-I      intronic chr2:25341110(+) A-I      intronic chr2:25341648(+) A-I      intronic chr2:25344867(+) A-I      intronic chr2:25345954(+) A-I      intronic chr2:25346036(+) A-I      intronic chr2:25349626(+) A-I      intronic chr2:25349941(+) A-I      intronic chr2:25350049(+) A-I      intronic chr2:25350064(+) A-I      intronic chr2:25351711(+) A-I      intronic chr2:25351721(+) A-I      intronic chr2:25284480(+) A-I      intronic chr2:25282613(+) A-I      intronic chr2:25327086(+) A-I      intronic chr2:25331621(+) A-I      intronic chr2:25371178(+) A-I      intronic chr2:25272745(+) A-I      intronic chr2:25346122(+) A-I      intronic chr2:25323018(+) A-I      intronic chr2:25349565(+) A-I      intronic chr2:25349303(+) A-I      intronic chr2:25270577(+) A-I      intronic chr2:25341085(+) A-I      intronic chr2:25284256(+) A-I      intronic chr2:25282214(+) A-I      intronic chr2:25316309(+) A-I      intronic chr2:25371227(+) A-I      intronic chr2:25374402(+) A-I      intronic chr2:25270471(+) A-I      intronic chr2:25374181(+) A-I      intronic chr2:25328125(+) A-I      intronic chr2:25339458(+) A-I      intronic chr2:25373024(+) A-I      intronic chr2:25317825(+) A-I      intronic chr2:25284179(+) A-I      intronic chr2:25371223(+) A-I      intronic chr2:25327077(+) A-I      intronic chr2:25272793(+) A-I      intronic chr2:25341779(+) A-I      intronic chr2:25322962(+) A-I      intronic chr2:25268412(+) A-I      intronic chr2:25282162(+) A-I      intronic chr2:25349309(+) A-I      intronic chr2:25373732(+) A-I      intronic chr2:25330965(+) A-I      intronic chr2:25340975(+) A-I      intronic chr2:25349500(+) A-I      intronic chr2:25323062(+) A-I      intronic chr2:25272879(+) A-I      intronic chr2:25270985(+) A-I      intronic chr2:25328167(+) A-I      intronic chr2:25346050(+) A-I      intronic chr2:25285922(+) A-I      intronic chr2:25343073(+) A-I      intronic chr2:25330923(+) A-I      intronic chr2:25340923(+) A-I      intronic chr2:25272721(+) A-I      intronic chr2:25276616(+) A-I      intronic chr2:25373663(+) A-I      intronic chr2:25282860(+) A-I      intronic chr2:25277372(+) A-I      intronic chr2:25316242(+) A-I      intronic chr2:25343141(+) A-I      intronic chr2:25337979(+) A-I      intronic chr2:25371146(+) A-I      intronic chr2:25345976(+) A-I      intronic chr2:25282099(+) A-I      intronic chr2:25372916(+) A-I      intronic chr2:25346051(+) A-I      intronic chr2:25379349(+) A-I      3'UTR chr2:25349807(+) A-I      intronic chr2:25349260(+) A-I      intronic chr2:25277451(+) A-I      intronic chr2:25284182(+) A-I      intronic chr2:25276617(+) A-I      intronic chr2:25277457(+) A-I      intronic chr2:25340949(+) A-I      intronic chr2:25349175(+) A-I      intronic chr2:25327080(+) A-I      intronic chr2:25341047(+) A-I      intronic chr2:25270478(+) A-I      intronic chr2:25281350(+) A-I      intronic chr2:25324402(+) A-I      intronic chr2:25331708(+) A-I      intronic chr2:25284492(+) A-I      intronic chr2:25328121(+) A-I      intronic chr2:25272989(+) A-I      intronic chr2:25349207(+) A-I      intronic chr2:25282985(+) A-I      intronic chr2:25284639(+) A-I      intronic chr2:25282196(+) A-I      intronic chr2:25372915(+) A-I      intronic chr2:25280579(+) A-I      intronic chr2:25270971(+) A-I      intronic chr2:25341655(+) A-I      intronic chr2:25370771(+) A-I      intronic chr2:25341118(+) A-I      intronic chr2:25280557(+) A-I      intronic chr2:25274730(+) A-I      intronic chr2:25373680(+) A-I      intronic chr2:25282633(+) A-I      intronic chr2:25318309(+) A-I      intronic chr2:25373528(+) A-I      intronic chr2:25373011(+) A-I      intronic chr2:25269241(+) A-I      intronic chr2:25371289(+) A-I      intronic chr2:25268531(+) A-I      intronic chr2:25282046(+) A-I      intronic chr2:25343807(+) A-I      intronic chr2:25349924(+) A-I      intronic chr2:25370819(+) A-I      intronic chr2:25271050(+) A-I      intronic chr2:25331596(+) A-I      intronic chr2:25373660(+) A-I      intronic chr2:25365867(+) A-I      intronic chr2:25349901(+) A-I      intronic chr2:25275583(+) A-I      intronic chr2:25374388(+) A-I      intronic chr2:25284144(+) A-I      intronic chr2:25327170(+) A-I      intronic chr2:25316198(+) A-I      intronic chr2:25282038(+) A-I      intronic chr2:25318310(+) A-I      intronic chr2:25328126(+) A-I      intronic chr2:25281507(+) A-I      intronic chr2:25349170(+) A-I      intronic chr2:25276605(+) A-I      intronic chr2:25372954(+) A-I      intronic chr2:25349503(+) A-I      intronic chr2:25374264(+) A-I      intronic chr2:25275633(+) A-I      intronic chr2:25274146(+) A-I      intronic chr2:25346186(+) A-I      intronic chr2:25339346(+) A-I      intronic chr2:25371269(+) A-I      intronic chr2:25270631(+) A-I      intronic chr2:25374325(+) A-I      intronic chr2:25346108(+) A-I      intronic chr2:25284093(+) A-I      intronic chr2:25284502(+) A-I      intronic chr2:25282215(+) A-I      intronic chr2:25277409(+) A-I      intronic chr2:25317080(+) A-I      intronic chr2:25316144(+) A-I      intronic chr2:25340555(+) A-I      intronic chr2:25373850(+) A-I      intronic chr2:25282895(+) A-I      intronic chr2:25331858(+) A-I      intronic chr2:25280644(+) A-I      intronic chr2:25276563(+) A-I      intronic chr2:25371253(+) A-I      intronic chr2:25373833(+) A-I      intronic chr2:25270610(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	EFR3B	chr2:25381506(+) A-I exon 3'UTR    19478186 chr2:25270399(+) A-G intron -    22484847 chr2:25276669(+) A-G intron -    22484847 chr2:25343073(+) A-G intron -    22484847 chr2:25370627(+) T-C intron -    22484847 chr2:25370631(+) T-C intron -    22484847 chr2:25370633(+) T-C intron -    22484847 chr2:25370850(+) T-C intron -    22484847 chr2:25371190(+) T-C intron -    22484847 chr2:25371191(+) T-C intron -    22484847 chr2:25373674(+) T-C intron -    22484847 chr2:25373752(+) T-C intron -    22484847 chr2:25373753(+) T-C intron -    22484847 chr2:25374192(+) T-C intron -    22484847 chr2:25374193(+) T-C intron -    22484847 chr2:25374307(+) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EFR3B	chr2:25367900-25367901(+) m6A CDS       24981863 chr2:25370730-25370731(+) m6A 3'UTR//intron       24981863 chr2:25377125-25377126(+) m6A CDS       24209618 chr2:25377156-25377157(+) m6A CDS       24209618 chr2:25377309-25377310(+) m6A 3'UTR       24284625//24981863 chr2:25377355-25377356(+) m6A 3'UTR       24284625//24981863 chr2:25377580-25377581(+) m6A 3'UTR       24209618//25456834//24981863//22608085 chr2:25377606-25377607(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr2:25380709-25380710(+) m6A 3'UTR       24981863 chr2:25380751-25380752(+) m6A 3'UTR       24981863 chr2:25380840-25380841(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EFR3B	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: EFR3B

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg