Basic Information:

  VIRBase ID:  

VHID00273981

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          PSMD5:  NM_005047     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	PSMD5
miRBase Accession/Entrez ID	MIMAT0029123	5711
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	S5B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PSMD5	chr9:123603054(-) A-I      intronic chr9:123603036(-) A-I      intronic chr9:123603019(-) A-I      intronic chr9:123599733(-) A-I      intronic chr9:123603097(-) A-I      intronic chr9:123596121(-) A-I      intronic chr9:123596432(-) A-I      intronic chr9:123586386(-) A-I      intronic chr9:123597866(-) A-I      intronic chr9:123596113(-) A-I      intronic chr9:123586333(-) A-I      intronic chr9:123603735(-) A-I      intronic chr9:123603676(-) A-I      intronic chr9:123596463(-) A-I      intronic chr9:123596437(-) A-I      intronic chr9:123593200(-) A-I      intronic chr9:123603673(-) A-I      intronic chr9:123585936(-) A-I      intronic chr9:123597820(-) A-I      intronic chr9:123603614(-) A-I      intronic chr9:123603613(-) A-I      intronic chr9:123603124(-) A-I      intronic chr9:123603110(-) A-I      intronic chr9:123603080(-) A-I      intronic chr9:123585901(-) A-I      intronic chr9:123579761(-) A-I      3'UTR chr9:123579766(-) A-I      3'UTR chr9:123579764(-) A-I      3'UTR chr9:123579634(-) A-I      3'UTR chr9:123579654(-) A-I      3'UTR chr9:123579677(-) A-I      3'UTR chr9:123579730(-) A-I      3'UTR chr9:123579789(-) A-I      3'UTR chr9:123579790(-) A-I      3'UTR chr9:123579828(-) A-I      3'UTR chr9:123579724(-) A-I      3'UTR chr9:123579741(-) A-I      3'UTR chr9:123579742(-) A-I      3'UTR chr9:123579752(-) A-I      3'UTR chr9:123602284(-) A-I      intronic chr9:123596537(-) A-I      intronic chr9:123584874(-) A-I      intronic chr9:123602348(-) A-I      intronic chr9:123603303(-) A-I      intronic chr9:123584826(-) A-I      intronic chr9:123602236(-) A-I      intronic chr9:123596085(-) A-I      intronic chr9:123596459(-) A-I      intronic chr9:123582002(-) A-I      intronic chr9:123586387(-) A-I      intronic chr9:123602137(-) A-I      intronic chr9:123596094(-) A-I      intronic chr9:123585149(-) A-I      intronic chr9:123602875(-) A-I      intronic chr9:123579767(-) A-I      3'UTR chr9:123579743(-) A-I      3'UTR chr9:123579673(-) A-I      3'UTR chr9:123579824(-) A-I      3'UTR chr9:123579744(-) A-I      3'UTR chr9:123602540(-) A-I      intronic chr9:123597746(-) A-I      intronic chr9:123603168(-) A-I      intronic chr9:123596130(-) A-I      intronic chr9:123602294(-) A-I      intronic chr9:123602330(-) A-I      intronic chr9:123602677(-) A-I      intronic chr9:123590885(-) A-I      intronic chr9:123585910(-) A-I      intronic chr9:123602664(-) A-I      intronic chr9:123602862(-) A-I      intronic chr9:123585602(-) A-I      intronic chr9:123603668(-) A-I      intronic chr9:123586042(-) A-I      intronic chr9:123598025(-) A-I      intronic chr9:123602495(-) A-I      intronic chr9:123585117(-) A-I      intronic chr9:123585844(-) A-I      intronic chr9:123603235(-) A-I      intronic chr9:123586332(-) A-I      intronic chr9:123597887(-) A-I      intronic chr9:123602319(-) A-I      intronic chr9:123597925(-) A-I      intronic chr9:123603225(-) A-I      intronic chr9:123602282(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PSMD5	chr9:123585910(-) A-I intron -    22327324 chr9:123598407(-) A-I intron -    21960545 chr9:123604447(-) T-G intron -    22484847 chr9:123579638(-) A-G exon 3'UTR    22484847 chr9:123585910(-) A-G intron -    22484847 chr9:123596531(-) A-G intron -    22484847 chr9:123596537(-) A-G intron -    22484847 chr9:123602862(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PSMD5	chr9:123578518-123578519(-) m6A 3'UTR//intron       27773535 chr9:123578532-123578533(-) m6A 3'UTR//intron       27773535 chr9:123578902-123578903(-) m6A 3'UTR//intron       27773535 chr9:123578993-123578994(-) m6A 3'UTR//intron       27773535 chr9:123579098-123579099(-) m6A 3'UTR//intron       26404942//27773535 chr9:123579107-123579108(-) m6A 3'UTR//intron       26404942//27773535 chr9:123579118-123579119(-) m6A 3'UTR//intron       26404942//27773535 chr9:123579133-123579134(-) m6A 3'UTR//intron       26404942//27773535 chr9:123579542-123579543(-) m6A 3'UTR//intron       27773535 chr9:123579575-123579576(-) m6A 3'UTR//intron       24981863//27773535 chr9:123579740-123579741(-) m6A 3'UTR//intron       27773535 chr9:123579763-123579764(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr9:123579878-123579879(-) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535 chr9:123579980-123579981(-) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535 chr9:123580009-123580010(-) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535 chr9:123580097-123580098(-) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535//22575960 chr9:123580141-123580142(-) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535//22575960 chr9:123580158-123580159(-) m6A 3'UTR//intron       24284625//24209618//24981863//26404942//27773535//22575960 chr9:123580219-123580220(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960 chr9:123580251-123580252(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960 chr9:123580274-123580275(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960 chr9:123580296-123580297(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960 chr9:123580324-123580325(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960 chr9:123580370-123580371(-) m6A CDS//intron       24284625//24209618//24981863//28052920//26404942//27773535//27371828//22575960 chr9:123580411-123580412(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960 chr9:123580430-123580431(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960 chr9:123583146-123583147(-) m6A CDS       24284625 chr9:123583244-123583245(-) m6A CDS       24284625 chr9:123593640-123593641(-) m6A CDS//exon//intron       22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PSMD5	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: PSMD5

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg