Basic Information:

  VIRBase ID:  

VHID00273660

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          DNAJB2:  NM_001039550     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	DNAJB2
miRBase Accession/Entrez ID	MIMAT0029123	3300
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CMT2T//DSMA5//HSJ-1//HSJ1//HSPF3

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DNAJB2	chr2:220150934(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DNAJB2	chr2:220144057-220144058(+) m6A 5'UTR       24981863 chr2:220144224-220144225(+) m6A 5'UTR//exon//intron       24209618//24981863 chr2:220144282-220144283(+) m6A 5'UTR//intron       24209618//24981863 chr2:220144646-220144647(+) m6A exon//intron       24209618 chr2:220145331-220145332(+) m6A CDS//exon       - chr2:220145337-220145338(+) m6A CDS//exon       - chr2:220149448-220149449(+) m6A CDS//exon       24284625 chr2:220149470-220149471(+) m6A CDS//exon       24284625 chr2:220149494-220149495(+) m6A CDS//exon       24284625 chr2:220149549-220149550(+) m6A CDS//exon       24284625//24209618//27371828 chr2:220149628-220149629(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828 chr2:220149709-220149710(+) m6A 3'UTR//exon//intron       24209618//25456834//24981863 chr2:220149800-220149801(+) m6A 3'UTR//exon//intron       24209618//25456834//24981863 chr2:220149865-220149866(+) m6A 3'UTR//exon//intron       24209618 chr2:220150068-220150069(+) m6A 3'UTR//exon//intron       24209618 chr2:220150761-220150762(+) m6A 3'UTR//exon       - chr2:220150791-220150792(+) m6A 3'UTR//exon       - chr2:220151020-220151021(+) m6A 3'UTR//exon       - chr2:220151056-220151057(+) Gm 3'UTR//exon       - chr2:220151242-220151243(+) m6A 3'UTR//exon       - chr2:220151457-220151458(+) m6A 3'UTR//exon       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DNAJB2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: DNAJB2

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg