Basic Information:

  VIRBase ID:  

VHID00273372

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL69:  MIMAT0029123          AP3S1:  NR_157085     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL69	AP3S1
miRBase Accession/Entrez ID	MIMAT0029123	1176
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CLAPS3//Sigma3A

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AP3S1	chr5:115190834(+) A-I      intronic chr5:115191167(+) A-I      intronic chr5:115181322(+) A-I      intronic chr5:115181504(+) A-I      intronic chr5:115181915(+) A-I      intronic chr5:115201625(+) A-I      intronic chr5:115201635(+) A-I      intronic chr5:115233374(+) A-I      intronic chr5:115190873(+) A-I      intronic chr5:115201596(+) A-I      intronic chr5:115181330(+) A-I      intronic chr5:115183136(+) A-I      intronic chr5:115190863(+) A-I      intronic chr5:115232314(+) A-I      intronic chr5:115232383(+) A-I      intronic chr5:115198781(+) A-I      intronic chr5:115197496(+) A-I      intronic chr5:115232320(+) A-I      intronic chr5:115239762(+) A-I      intronic chr5:115232221(+) A-I      intronic chr5:115197472(+) A-I      intronic chr5:115237391(+) A-I      intronic chr5:115181275(+) A-I      intronic chr5:115232311(+) A-I      intronic chr5:115181926(+) A-I      intronic chr5:115183210(+) A-I      intronic chr5:115181284(+) A-I      intronic chr5:115233466(+) A-I      intronic chr5:115181894(+) A-I      intronic chr5:115198841(+) A-I      intronic chr5:115197364(+) A-I      intronic chr5:115241716(+) A-I      intronic chr5:115233337(+) A-I      intronic chr5:115181267(+) A-I      intronic chr5:115237355(+) A-I      intronic chr5:115199150(+) A-I      intronic chr5:115181980(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AP3S1	chr5:115232314(+) A-I intron -    22327324 chr5:115181968(+) A-G intron -    22484847 chr5:115190916(+) A-T intron -    22484847 chr5:115201683(+) C-T intron -    22484847 chr5:115232198(+) A-G intron -    22484847 chr5:115232229(+) A-G intron -    22484847 chr5:115232311(+) A-G intron -    22484847 chr5:115232314(+) A-G intron -    22484847 chr5:115232355(+) A-G intron -    22484847 chr5:115233278(+) A-G intron -    22484847 chr5:115233337(+) A-G intron -    22484847 chr5:115241678(+) T-C intron -    22484847 chr5:115241716(+) A-G intron -    22484847 chr5:115245795(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AP3S1	chr5:115177230-115177231(+) m6A 5'UTR       24981863 chr5:115177260-115177261(+) m6A 5'UTR       24981863 chr5:115177367-115177368(+) m6A 5'UTR//exon       24981863//27773535 chr5:115177410-115177411(+) m6A 5'UTR//exon       24981863//27773535 chr5:115177456-115177457(+) m6A 5'UTR//exon       24981863//27773535 chr5:115177532-115177533(+) m6A 5'UTR//intron       24981863 chr5:115178229-115178230(+) m6A exon//intron       - chr5:115205800-115205801(+) m6A CDS//exon//intron       27773535 chr5:115230795-115230796(+) m6A CDS//exon       27773535 chr5:115230802-115230803(+) m6A CDS//exon       27773535 chr5:115230850-115230851(+) m6A CDS//exon       27773535 chr5:115234366-115234367(+) m6A exon//intron       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AP3S1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL69
Interactor2: AP3S1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg