Basic Information:

  VIRBase ID:  

VHID00272816

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL59:  MIMAT0029122          GCSAM:  NM_001190259     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL59	GCSAM
miRBase Accession/Entrez ID	MIMAT0029122	257144
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GCAT2//GCET2//HGAL

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GCSAM	chr3:111842102-111842103(-) m6A 3'UTR       - chr3:111842222-111842223(-) m6A 3'UTR       28052920//27371828 chr3:111842288-111842289(-) m6A 3'UTR       28052920//27371828 chr3:111842321-111842322(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842391-111842392(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842428-111842429(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842462-111842463(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842468-111842469(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842490-111842491(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842536-111842537(-) m6A 3'UTR//CDS       28052920//27371828 chr3:111842603-111842604(-) m6A 3'UTR//CDS       27371828 chr3:111847070-111847071(-) m6A CDS//intron       28052920//27371828 chr3:111849298-111849299(-) m6A CDS       28052920//27371828 chr3:111849305-111849306(-) m6A CDS       28052920//27371828 chr3:111849348-111849349(-) m6A 5'UTR//CDS       28052920//27371828 chr3:111851538-111851539(-) m6A 5'UTR//intron       28052920//27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GCSAM	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL59
Interactor2: GCSAM

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg