Detail Information

Basic Information:


  VIRBase ID:  

VHID00271302

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL59:           SVOP:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-UL59 SVOP
miRBase
Accession/Entrez ID		 MIMAT0029122 55530
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SVOP
chr12:109356344(-) A-I      intronic
chr12:109356336(-) A-I      intronic
chr12:109356321(-) A-I      intronic
chr12:109356309(-) A-I      intronic
chr12:109426791(-) A-I      intronic
chr12:109426782(-) A-I      intronic
chr12:109426771(-) A-I      intronic
chr12:109426753(-) A-I      intronic
chr12:109426751(-) A-I      intronic
chr12:109356362(-) A-I      intronic
chr12:109356353(-) A-I      intronic
chr12:109347197(-) A-I      intronic
chr12:109362778(-) A-I      intronic
chr12:109343932(-) A-I      intronic
chr12:109346599(-) A-I      intronic
chr12:109346122(-) A-I      intronic
chr12:109343894(-) A-I      intronic
chr12:109337208(-) A-I      intronic
chr12:109343967(-) A-I      intronic
chr12:109347196(-) A-I      intronic
chr12:109344106(-) A-I      intronic
chr12:109430850(-) A-I      intronic
chr12:109338064(-) A-I      intronic
chr12:109359905(-) A-I      intronic
chr12:109346540(-) A-I      intronic
chr12:109356308(-) A-I      intronic
chr12:109363306(-) A-I      intronic
chr12:109361212(-) A-I      intronic
chr12:109346175(-) A-I      intronic
chr12:109373084(-) A-I      intronic
chr12:109353318(-) A-I      intronic
chr12:109357286(-) A-I      intronic
chr12:109447845(-) A-I      intronic
chr12:109337117(-) A-I      intronic
chr12:109346491(-) A-I      intronic
chr12:109451959(-) A-I      intronic
chr12:109327356(-) A-I      intronic
chr12:109307700(-) A-I      intronic
chr12:109430981(-) A-I      intronic
chr12:109451441(-) A-I      intronic
chr12:109335077(-) A-I      intronic
chr12:109346178(-) A-I      intronic
chr12:109430791(-) A-I      intronic
chr12:109447841(-) A-I      intronic
chr12:109362773(-) A-I      intronic
chr12:109325353(-) A-I      intronic
chr12:109346171(-) A-I      intronic
chr12:109330707(-) A-I      intronic
chr12:109373236(-) A-I      intronic
chr12:109337192(-) A-I      intronic
chr12:109364573(-) A-I      intronic
chr12:109305355(-) A-I      3'UTR
chr12:109346143(-) A-I      intronic
chr12:109324311(-) A-I      intronic
chr12:109308430(-) A-I      intronic
chr12:109430984(-) A-I      intronic
chr12:109364787(-) A-I      intronic
chr12:109430977(-) A-I      intronic
chr12:109344291(-) A-I      intronic
chr12:109336626(-) A-I      intronic
chr12:109326924(-) A-I      intronic
chr12:109308769(-) A-I      intronic
chr12:109373076(-) A-I      intronic
chr12:109346632(-) A-I      intronic
chr12:109308412(-) A-I      intronic
chr12:109337834(-) A-I      intronic
chr12:109348562(-) A-I      intronic
chr12:109324247(-) A-I      intronic
chr12:109445759(-) A-I      intronic
chr12:109327370(-) A-I      intronic
chr12:109430995(-) A-I      intronic
chr12:109336807(-) A-I      intronic
chr12:109362790(-) A-I      intronic
chr12:109337288(-) A-I      intronic
chr12:109452764(-) A-I      intronic
chr12:109343144(-) A-I      intronic
chr12:109344283(-) A-I      intronic
chr12:109337180(-) A-I      intronic
chr12:109336810(-) A-I      intronic
chr12:109340623(-) A-I      intronic
chr12:109308606(-) A-I      intronic
chr12:109346179(-) A-I      intronic
chr12:109325930(-) A-I      intronic
chr12:109346523(-) A-I      intronic
chr12:109355977(-) A-I      intronic
chr12:109336705(-) A-I      intronic
chr12:109431006(-) A-I      intronic
chr12:109373282(-) A-I      intronic
chr12:109346301(-) A-I      intronic
chr12:109343908(-) A-I      intronic
chr12:109346149(-) A-I      intronic
chr12:109441451(-) A-I      intronic
chr12:109453535(-) A-I      intronic
chr12:109356023(-) A-I      intronic
chr12:109337786(-) A-I      intronic
chr12:109337263(-) A-I      intronic
chr12:109357887(-) A-I      intronic
chr12:109346480(-) A-I      intronic
chr12:109337368(-) A-I      intronic
chr12:109326910(-) A-I      intronic
chr12:109324351(-) A-I      intronic
chr12:109452665(-) A-I      intronic
chr12:109343143(-) A-I      intronic
chr12:109363196(-) A-I      intronic
chr12:109364546(-) A-I      intronic
chr12:109344287(-) A-I      intronic
chr12:109445760(-) A-I      intronic
chr12:109362666(-) A-I      intronic
chr12:109336743(-) A-I      intronic
chr12:109308420(-) A-I      intronic
chr12:109430760(-) A-I      intronic
chr12:109324348(-) A-I      intronic
chr12:109326875(-) A-I      intronic
chr12:109357874(-) A-I      intronic
chr12:109344319(-) A-I      intronic
chr12:109336687(-) A-I      intronic
chr12:109446111(-) A-I      intronic
chr12:109306915(-) A-I      intronic
chr12:109337832(-) A-I      intronic
chr12:109432749(-) A-I      intronic
chr12:109307694(-) A-I      intronic
chr12:109430991(-) A-I      intronic
chr12:109343937(-) A-I      intronic
chr12:109326823(-) A-I      intronic
chr12:109449831(-) A-I      intronic
chr12:109326848(-) A-I      intronic
chr12:109308867(-) A-I      intronic
chr12:109452729(-) A-I      intronic
chr12:109364547(-) A-I      intronic
chr12:109322451(-) A-I      intronic
chr12:109430983(-) A-I      intronic
chr12:109308503(-) A-I      intronic
chr12:109432081(-) A-I      intronic
chr12:109359892(-) A-I      intronic
chr12:109362708(-) A-I      intronic
chr12:109451913(-) A-I      intronic
chr12:109432824(-) A-I      intronic
chr12:109346376(-) A-I      intronic
chr12:109313738(-) A-I      intronic
chr12:109337291(-) A-I      intronic
chr12:109356043(-) A-I      intronic
chr12:109336808(-) A-I      intronic
chr12:109430992(-) A-I      intronic
chr12:109429183(-) A-I      intronic
chr12:109346364(-) A-I      intronic
chr12:109347089(-) A-I      intronic
chr12:109451683(-) A-I      intronic
chr12:109346285(-) A-I      intronic
chr12:109317447(-) A-I      intronic
chr12:109336678(-) A-I      intronic
chr12:109451682(-) A-I      intronic
chr12:109448553(-) A-I      intronic
chr12:109336844(-) A-I      intronic
chr12:109454623(-) A-I      intronic
chr12:109445829(-) A-I      intronic
chr12:109308399(-) A-I      intronic
chr12:109344297(-) A-I      intronic
chr12:109355972(-) A-I      intronic
chr12:109337253(-) A-I      intronic
chr12:109308561(-) A-I      intronic
chr12:109326803(-) A-I      intronic
chr12:109363375(-) A-I      intronic
chr12:109324414(-) A-I      intronic
chr12:109306875(-) A-I      intronic
chr12:109336679(-) A-I      intronic
chr12:109317446(-) A-I      intronic
chr12:109346519(-) A-I      intronic
chr12:109346403(-) A-I      intronic
chr12:109353333(-) A-I      intronic
chr12:109452624(-) A-I      intronic
chr12:109305425(-) A-I      3'UTR
chr12:109305380(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SVOP
chr12:109306190-109306191(-) m6A 3'UTR       25456834
chr12:109306213-109306214(-) m6A 3'UTR       25456834
chr12:109306296-109306297(-) m6A 3'UTR       25456834
chr12:109306329-109306330(-) m6A CDS       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SVOP
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-UL59
Interactor2: SVOP

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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