Basic Information:

  VIRBase ID:  

VHID00268457

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US29-3p:  MIMAT0028168          AMZ1:  NM_001384739     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US29-3p	AMZ1
miRBase Accession/Entrez ID	MIMAT0028168	155185
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AMZ1	chr7:2791009(+) A-I      intronic chr7:2738325(+) A-I      intronic chr7:2792968(+) A-I      intronic chr7:2745926(+) A-I      intronic chr7:2726881(+) A-I      intronic chr7:2738340(+) A-I      intronic chr7:2734189(+) A-I      intronic chr7:2761096(+) A-I      intronic chr7:2738261(+) A-I      intronic chr7:2738289(+) A-I      intronic chr7:2738307(+) A-I      intronic chr7:2738328(+) A-I      intronic chr7:2762080(+) A-I      intronic chr7:2736749(+) A-I      intronic chr7:2762406(+) A-I      intronic chr7:2762090(+) A-I      intronic chr7:2736742(+) A-I      intronic chr7:2746653(+) A-I      intronic chr7:2762087(+) A-I      intronic chr7:2751463(+) A-I      intronic chr7:2767418(+) A-I      intronic chr7:2736936(+) A-I      intronic chr7:2759482(+) A-I      intronic chr7:2762513(+) A-I      intronic chr7:2762514(+) A-I      intronic chr7:2740745(+) A-I      intronic chr7:2767111(+) A-I      intronic chr7:2725113(+) A-I      intronic chr7:2759538(+) A-I      intronic chr7:2759432(+) A-I      intronic chr7:2738373(+) A-I      intronic chr7:2743730(+) A-I      intronic chr7:2762364(+) A-I      intronic chr7:2759371(+) A-I      intronic chr7:2762425(+) A-I      intronic chr7:2736165(+) A-I      intronic chr7:2759454(+) A-I      intronic chr7:2767570(+) A-I      intronic chr7:2762351(+) A-I      intronic chr7:2736817(+) A-I      intronic chr7:2746786(+) A-I      intronic chr7:2762570(+) A-I      intronic chr7:2726107(+) A-I      intronic chr7:2767580(+) A-I      intronic chr7:2762405(+) A-I      intronic chr7:2759577(+) A-I      intronic chr7:2781773(+) A-I      intronic chr7:2738160(+) A-I      intronic chr7:2733371(+) A-I      intronic chr7:2725065(+) A-I      intronic chr7:2759537(+) A-I      intronic chr7:2733396(+) A-I      intronic chr7:2746787(+) A-I      intronic chr7:2726047(+) A-I      intronic chr7:2761235(+) A-I      intronic chr7:2762568(+) A-I      intronic chr7:2762501(+) A-I      intronic chr7:2762179(+) A-I      intronic chr7:2726041(+) A-I      intronic chr7:2733147(+) A-I      intronic chr7:2766985(+) A-I      intronic chr7:2762464(+) A-I      intronic chr7:2762460(+) A-I      intronic chr7:2762408(+) A-I      intronic chr7:2762112(+) A-I      intronic chr7:2762167(+) A-I      intronic chr7:2762400(+) A-I      intronic chr7:2759408(+) A-I      intronic chr7:2751290(+) A-I      intronic chr7:2767427(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AMZ1	chr7:2743982(+) T-C intron -    22484847 chr7:2744071(+) T-C intron -    22484847 chr7:2746786(+) A-G intron -    22484847 chr7:2746787(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AMZ1	chr7:2739942-2739943(+) m6A 5'UTR       25456834 chr7:2740010-2740011(+) m6A 5'UTR       25456834 chr7:2740039-2740040(+) m6A 5'UTR       25456834 chr7:2740099-2740100(+) m6A CDS       25456834 chr7:2740311-2740312(+) m6A CDS       - chr7:2740319-2740320(+) m6A CDS       - chr7:2749382-2749383(+) m6A CDS//exon       - chr7:2751965-2751966(+) m6A CDS//intron       25456834 chr7:2751978-2751979(+) m6A CDS//intron       25456834 chr7:2752039-2752040(+) m6A CDS//intron       25456834 chr7:2752291-2752292(+) m6A 3'UTR//CDS//intron       25456834 chr7:2752306-2752307(+) m6A 3'UTR//CDS//intron       25456834 chr7:2752372-2752373(+) m6A 3'UTR//CDS//intron       25456834 chr7:2752390-2752391(+) m6A 3'UTR//CDS//intron       25456834 chr7:2752420-2752421(+) m6A 3'UTR//CDS//intron       25456834 chr7:2752460-2752461(+) m6A 3'UTR//CDS//intron       25456834 chr7:2752672-2752673(+) m6A 3'UTR//intron       25456834 chr7:2752677-2752678(+) m6A 3'UTR//intron       25456834 chr7:2752695-2752696(+) m6A 3'UTR//intron       25456834 chr7:2752865-2752866(+) m6A 3'UTR//intron       25456834 chr7:2752906-2752907(+) m6A 3'UTR//intron       25456834 chr7:2753023-2753024(+) m6A 3'UTR//intron       25456834 chr7:2753040-2753041(+) m6A 3'UTR//intron       25456834 chr7:2753327-2753328(+) m6A 3'UTR//intron       - chr7:2753363-2753364(+) m6A 3'UTR//intron       25456834 chr7:2753473-2753474(+) m6A 3'UTR//intron       25456834 chr7:2753769-2753770(+) m6A 3'UTR//intron       25456834 chr7:2753853-2753854(+) m6A 3'UTR//intron       25456834 chr7:2753867-2753868(+) m6A 3'UTR//intron       25456834 chr7:2753917-2753918(+) m6A 3'UTR//intron       25456834 chr7:2754923-2754924(+) m6A 3'UTR//intron       - chr7:2755273-2755274(+) m6A 3'UTR//intron       - chr7:2755288-2755289(+) m6A 3'UTR//intron       - chr7:2755389-2755390(+) m6A 3'UTR//intron       - chr7:2815055-2815056(+) m6A exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AMZ1	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US29-3p
Interactor2: AMZ1

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg