Basic Information:

  VIRBase ID:  

VHID00267615

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US29-3p:  MIMAT0028168          HOXB4:  NM_024015     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US29-3p	HOXB4
miRBase Accession/Entrez ID	MIMAT0028168	3214
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HOX-2.6//HOX2//HOX2F

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HOXB4	chr17:46653297-46653298(-) m6A 3'UTR       24981863//28052920//27371828//22608085 chr17:46653305-46653306(-) m6A 3'UTR       24981863//28052920//27371828//22608085 chr17:46653573-46653574(-) m6A 3'UTR       28052920//22608085 chr17:46653791-46653792(-) m6A 3'UTR       27371828//22608085 chr17:46654011-46654012(-) m6A 3'UTR       22608085 chr17:46654058-46654059(-) m6A 3'UTR       28052920//27371828//22608085 chr17:46654180-46654181(-) m6A CDS       27371828//27773536 chr17:46654204-46654205(-) m6A CDS       27371828//27773536 chr17:46654340-46654341(-) m6A CDS       28052920 chr17:46654378-46654379(-) m6A CDS       28052920 chr17:46655307-46655308(-) m6A CDS       28052920//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HOXB4	Exosome Blood     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US29-3p
Interactor2: HOXB4

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg