Basic Information:

  VIRBase ID:  

VHID00266690

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US29-5p:  MIMAT0028167          C1orf116:  NM_001083924     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US29-5p	C1orf116
miRBase Accession/Entrez ID	MIMAT0028167	79098
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SARG

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C1orf116	chr1:207194769-207194770(-) m6A 3'UTR       25456834//24981863 chr1:207194816-207194817(-) m6A 3'UTR       25456834//24981863 chr1:207194912-207194913(-) m6A 3'UTR       25456834//24981863 chr1:207194929-207194930(-) m6A 3'UTR       25456834//24981863 chr1:207195257-207195258(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960 chr1:207195267-207195268(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960 chr1:207195283-207195284(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960 chr1:207195301-207195302(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22575960 chr1:207195317-207195318(-) m6A CDS       24209618//25456834//24981863//27773535//22575960 chr1:207195347-207195348(-) m6A CDS       24209618//25456834//24981863//27773535//22575960 chr1:207195419-207195420(-) m6A CDS       25456834//24981863//22575960 chr1:207195561-207195562(-) m6A CDS       24209618//25456834//24981863 chr1:207195595-207195596(-) m6A CDS       25456834//24981863 chr1:207195638-207195639(-) m6A CDS       24209618//25456834//24981863 chr1:207195675-207195676(-) m6A CDS       24209618//25456834//24981863 chr1:207195683-207195684(-) m6A CDS       24209618//25456834//24981863 chr1:207195753-207195754(-) m6A CDS       25456834//24981863 chr1:207195973-207195974(-) m6A CDS       24981863 chr1:207195983-207195984(-) m6A CDS       24981863 chr1:207196016-207196017(-) m6A CDS       24981863 chr1:207196248-207196249(-) m6A CDS       24981863//27773535 chr1:207196254-207196255(-) m6A CDS       24981863//27773535 chr1:207196348-207196349(-) m6A CDS       24209618//25456834//24981863//27773535 chr1:207196384-207196385(-) m6A 5'UTR//CDS       24209618//25456834//24981863 chr1:207196442-207196443(-) m6A 5'UTR//CDS       24209618//25456834//24981863 chr1:207196491-207196492(-) m6A 5'UTR//CDS       24209618//25456834//24981863 chr1:207196595-207196596(-) m6A 5'UTR//CDS       24209618//25456834//24981863 chr1:207196628-207196629(-) m6A 5'UTR//CDS       24209618//25456834//24981863//27773535 chr1:207196674-207196675(-) m6A 5'UTR//CDS       24209618//25456834//24981863//27773535 chr1:207196780-207196781(-) m6A 5'UTR//CDS       25456834//24981863//27773535 chr1:207196810-207196811(-) m6A 5'UTR//CDS       24981863 chr1:207201011-207201012(-) m6A 5'UTR//intron       24981863 chr1:207205968-207205969(-) m6A 5'UTR       24981863 chr1:207206018-207206019(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C1orf116	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US29-5p
Interactor2: C1orf116

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg