Basic Information:

  VIRBase ID:  

VHID00264931

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:  MIMAT0028166          PMF1-BGLAP:  NM_001199662     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US22-3p	PMF1-BGLAP
miRBase Accession/Entrez ID	MIMAT0028166	100527963
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PMF-1//PMF1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PMF1-BGLAP	chr1:156210121(+) A-I      intronic chr1:156210326(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PMF1-BGLAP	chr1:156182933-156182934(+) m6A CDS       24981863//22575960 chr1:156206146-156206147(+) m6A CDS//intron       24209618//22575960 chr1:156206171-156206172(+) m6A CDS//intron       24209618//22575960 chr1:156206185-156206186(+) m6A CDS//intron       24209618//24981863//22575960 chr1:156206365-156206366(+) m6A intron       24209618 chr1:156207078-156207079(+) m6A intron       24209618 chr1:156209352-156209353(+) m6A intron       24209618 chr1:156209396-156209397(+) m6A intron       24209618 chr1:156209529-156209530(+) m6A intron       24284625//24981863//22575960 chr1:156209585-156209586(+) m6A intron       24284625//24981863//22575960 chr1:156209812-156209813(+) m6A intron       24284625 chr1:156212320-156212321(+) m6A intron       - chr1:156212592-156212593(+) m6A 3'UTR//CDS       - chr1:156212885-156212886(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PMF1-BGLAP	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US22-3p
Interactor2: PMF1-BGLAP

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg