Basic Information:

  VIRBase ID:  

VHID00264888

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:  MIMAT0028166          C3orf80:  NM_001168214     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US22-3p	C3orf80
miRBase Accession/Entrez ID	MIMAT0028166	401097
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C3orf80	chr3:159943430-159943431(+) m6A CDS       - chr3:159943639-159943640(+) m6A CDS//exon       - chr3:159943772-159943773(+) m6A CDS//exon       24981863 chr3:159943802-159943803(+) m6A CDS//exon       24981863//22608085 chr3:159943885-159943886(+) m6A CDS//exon       25456834//24981863//22608085 chr3:159943897-159943898(+) m6A CDS//exon       25456834//24981863//22608085 chr3:159943942-159943943(+) m6A CDS//exon       25456834//24981863//22608085 chr3:159944249-159944250(+) m6A 3'UTR//exon       25456834//24981863//22608085 chr3:159944498-159944499(+) m6A 3'UTR//exon//intron       24981863//22608085 chr3:159944559-159944560(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr3:159944595-159944596(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr3:159944637-159944638(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr3:159944654-159944655(+) m6A 3'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr3:159944717-159944718(+) m6A 3'UTR//exon//intron       25456834//24981863//22608085 chr3:159944811-159944812(+) m6A 3'UTR//exon//intron       24981863 chr3:159944852-159944853(+) m6A 3'UTR//exon//intron       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C3orf80	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US22-3p
Interactor2: C3orf80

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg