Detail Information

Basic Information:


  VIRBase ID:  

VHID00264855

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:           WDR86:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US22-3p WDR86
miRBase
Accession/Entrez ID		 MIMAT0028166 349136
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR WDR86
chr7:151104803(-) A-I      intronic
chr7:151105463(-) A-I      intronic
chr7:151097570(-) A-I      intronic
chr7:151097565(-) A-I      intronic
chr7:151097564(-) A-I      intronic
chr7:151105454(-) A-I      intronic
chr7:151105557(-) A-I      intronic
chr7:151080667(-) A-I      intronic
chr7:151080380(-) A-I      intronic
chr7:151080368(-) A-I      intronic
chr7:151080300(-) A-I      intronic
chr7:151080164(-) A-I      intronic
chr7:151105462(-) A-I      intronic
chr7:151105518(-) A-I      intronic
chr7:151105488(-) A-I      intronic
chr7:151080104(-) A-I      intronic
chr7:151105420(-) A-I      intronic
chr7:151105411(-) A-I      intronic
chr7:151105388(-) A-I      intronic
chr7:151097673(-) A-I      intronic
chr7:151097662(-) A-I      intronic
chr7:151097657(-) A-I      intronic
chr7:151097647(-) A-I      intronic
chr7:151097645(-) A-I      intronic
chr7:151097644(-) A-I      intronic
chr7:151097632(-) A-I      intronic
chr7:151105457(-) A-I      intronic
chr7:151097616(-) A-I      intronic
chr7:151097606(-) A-I      intronic
chr7:151097596(-) A-I      intronic
chr7:151097592(-) A-I      intronic
chr7:151105385(-) A-I      intronic
chr7:151105375(-) A-I      intronic
chr7:151105368(-) A-I      intronic
chr7:151105350(-) A-I      intronic
chr7:151104779(-) A-I      intronic
chr7:151104733(-) A-I      intronic
chr7:151099048(-) A-I      intronic
chr7:151105500(-) A-I      intronic
chr7:151098936(-) A-I      intronic
chr7:151098910(-) A-I      intronic
chr7:151098882(-) A-I      intronic
chr7:151097682(-) A-I      intronic
chr7:151105421(-) A-I      intronic
chr7:151097504(-) A-I      intronic
chr7:151104742(-) A-I      intronic
chr7:151098968(-) A-I      intronic
chr7:151098883(-) A-I      intronic
chr7:151098879(-) A-I      intronic
chr7:151080313(-) A-I      intronic
chr7:151080438(-) A-I      intronic
chr7:151097553(-) A-I      intronic
chr7:151104864(-) A-I      intronic
chr7:151080556(-) A-I      intronic
chr7:151105487(-) A-I      intronic
chr7:151080447(-) A-I      intronic
chr7:151080312(-) A-I      intronic
chr7:151080477(-) A-I      intronic
chr7:151098954(-) A-I      intronic
chr7:151104668(-) A-I      intronic
chr7:151104845(-) A-I      intronic
chr7:151080484(-) A-I      intronic
chr7:151080676(-) A-I      intronic
chr7:151080226(-) A-I      intronic
chr7:151080305(-) A-I      intronic
chr7:151105550(-) A-I      intronic
chr7:151080653(-) A-I      intronic
chr7:151104708(-) A-I      intronic
chr7:151080675(-) A-I      intronic
chr7:151104713(-) A-I      intronic
chr7:151080186(-) A-I      intronic
chr7:151104762(-) A-I      intronic
chr7:151105579(-) A-I      intronic
chr7:151080602(-) A-I      intronic
chr7:151099072(-) A-I      intronic
chr7:151080314(-) A-I      intronic
chr7:151104768(-) A-I      intronic
chr7:151105556(-) A-I      intronic
chr7:151080388(-) A-I      intronic
chr7:151105563(-) A-I      intronic
chr7:151104805(-) A-I      intronic
chr7:151104759(-) A-I      intronic
chr7:151104817(-) A-I      intronic
chr7:151105511(-) A-I      intronic
chr7:151080394(-) A-I      intronic
chr7:151080451(-) A-I      intronic
chr7:151080322(-) A-I      intronic
chr7:151105477(-) A-I      intronic
chr7:151104926(-) A-I      intronic
chr7:151097741(-) A-I      intronic
chr7:151080460(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED WDR86
chr7:151080312(-) A-I intron -    15342557   //15258596
chr7:151080388(-) A-I intron -    15342557   //15258596
chr7:151080451(-) A-I intron -    15342557
chr7:151080556(-) A-I intron -    15342557
chr7:151080602(-) A-I intron -    15342557
chr7:151080653(-) A-I intron -    15342557   //15258596
chr7:151080658(-) A-I intron -    15342557   //15258596
chr7:151080675(-) A-I intron -    15342557   //15258596
chr7:151081791(-) A-I intron -    15342557
chr7:151097553(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase WDR86
chr7:151073122-151073123(-) m6A exon       25456834
chr7:151073248-151073249(-) m6A exon       25456834
chr7:151073259-151073260(-) m6A exon       25456834
chr7:151073272-151073273(-) m6A exon       25456834
chr7:151073286-151073287(-) m6A exon       25456834
chr7:151073380-151073381(-) m6A exon       25456834
chr7:151073495-151073496(-) m6A exon       25456834
chr7:151073532-151073533(-) m6A exon       25456834
chr7:151073733-151073734(-) m6A exon       25456834
chr7:151073770-151073771(-) m6A exon       25456834
chr7:151073863-151073864(-) m6A exon       25456834
chr7:151073902-151073903(-) m6A exon       25456834
chr7:151073909-151073910(-) m6A exon       25456834
chr7:151073938-151073939(-) m6A exon       25456834
chr7:151078236-151078237(-) m6A 3'UTR//intron       25456834//24981863//27773535
chr7:151078282-151078283(-) m6A 3'UTR//intron       25456834
chr7:151078331-151078332(-) m6A 3'UTR//intron       25456834//24981863
chr7:151078359-151078360(-) m6A 3'UTR//intron       25456834//24981863
chr7:151078387-151078388(-) m6A 3'UTR//intron       25456834//24981863
chr7:151078465-151078466(-) m6A 3'UTR//CDS//intron       25456834
chr7:151082247-151082248(-) m6A CDS//intron       -
chr7:151082269-151082270(-) m6A CDS//intron       -
chr7:151082274-151082275(-) m6A CDS//intron       -
chr7:151092925-151092926(-) m6A CDS//exon       25456834//27773536
chr7:151092982-151092983(-) m6A CDS//exon       25456834//27773536
chr7:151093138-151093139(-) m6A CDS       25456834
chr7:151093213-151093214(-) m6A 5'UTR//CDS       25456834
chr7:151093235-151093236(-) m6A 5'UTR//CDS       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate WDR86
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US22-3p
Interactor2: WDR86

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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