Basic Information:

  VIRBase ID:  

VHID00264851

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:  MIMAT0028166          LRRTM1:  NM_178839     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US22-3p	LRRTM1
miRBase Accession/Entrez ID	MIMAT0028166	347730
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	LRRTM1	chr2:80529152-80529153(-) m6A 3'UTR       27773535 chr2:80529174-80529175(-) m6A 3'UTR       27773535 chr2:80529186-80529187(-) m6A 3'UTR       27773535 chr2:80529202-80529203(-) m6A 3'UTR       27773535 chr2:80529234-80529235(-) m6A 3'UTR       27773535 chr2:80529258-80529259(-) m6A 3'UTR       27773535 chr2:80529522-80529523(-) m6A CDS       25456834 chr2:80530003-80530004(-) m6A CDS       25456834 chr2:80530081-80530082(-) m6A CDS       25456834 chr2:80530112-80530113(-) m6A CDS       25456834 chr2:80530159-80530160(-) m6A CDS       25456834 chr2:80530174-80530175(-) m6A CDS       25456834 chr2:80530186-80530187(-) m6A CDS       25456834 chr2:80530216-80530217(-) m6A CDS       25456834 chr2:80530270-80530271(-) m6A CDS       25456834 chr2:80531488-80531489(-) m6A 5'UTR//intron       25456834 chr2:80531550-80531551(-) m6A 5'UTR//intron       25456834

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US22-3p
Interactor2: LRRTM1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg