Basic Information:

  VIRBase ID:  

VHID00264785

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:  MIMAT0028166          EHBP1L1:  NM_001099409     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US22-3p	EHBP1L1
miRBase Accession/Entrez ID	MIMAT0028166	254102
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EHBP1L1	chr11:65351239(+) A-I      intronic chr11:65358292(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EHBP1L1	chr11:65343584-65343585(+) m6A 5'UTR       24209618//24981863//27371828 chr11:65343594-65343595(+) m6A 5'UTR       24209618//24981863//27371828 chr11:65343653-65343654(+) m6A 5'UTR       24209618//24981863//27371828 chr11:65343685-65343686(+) m6A 5'UTR       24209618//24981863//27371828 chr11:65343698-65343699(+) m6A 5'UTR       24209618//27371828 chr11:65345719-65345720(+) m6A exon//intron       24209618 chr11:65345744-65345745(+) m6A exon//intron       24209618 chr11:65346576-65346577(+) m6A CDS//exon       24209618 chr11:65346586-65346587(+) m6A CDS//exon       24209618 chr11:65346839-65346840(+) m6A CDS//exon       24209618//24981863 chr11:65346884-65346885(+) m6A CDS       24981863 chr11:65347419-65347420(+) m6A CDS       24284625//24981863 chr11:65347442-65347443(+) m6A CDS       24284625 chr11:65347594-65347595(+) m6A CDS       24284625 chr11:65348749-65348750(+) m6A CDS//intron       24981863 chr11:65348827-65348828(+) m6A CDS//intron       24981863 chr11:65349032-65349033(+) m6A CDS//exon//intron       24981863 chr11:65349163-65349164(+) m6A CDS//exon//intron       24284625//24209618//25456834 chr11:65349193-65349194(+) m6A CDS//exon//intron       24284625//24209618//25456834 chr11:65349248-65349249(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960 chr11:65349267-65349268(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//22575960 chr11:65349287-65349288(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//22575960 chr11:65349296-65349297(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//22575960 chr11:65349320-65349321(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//22575960 chr11:65349353-65349354(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//22575960 chr11:65349441-65349442(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960 chr11:65349449-65349450(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960 chr11:65349459-65349460(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960 chr11:65349502-65349503(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349550-65349551(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349703-65349704(+) m6A CDS//exon//intron       24284625//24209618//22575960 chr11:65349848-65349849(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349856-65349857(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349862-65349863(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349892-65349893(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349931-65349932(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65349937-65349938(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350015-65350016(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350032-65350033(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350039-65350040(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350048-65350049(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350069-65350070(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350078-65350079(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350084-65350085(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350099-65350100(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350108-65350109(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350138-65350139(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350144-65350145(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350159-65350160(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350243-65350244(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350252-65350253(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350297-65350298(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350318-65350319(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350413-65350414(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350438-65350439(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350468-65350469(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350579-65350580(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350588-65350589(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350603-65350604(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350672-65350673(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350747-65350748(+) m6A CDS//exon//intron       24209618//24981863 chr11:65350789-65350790(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350813-65350814(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65350927-65350928(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65351042-65351043(+) m6A CDS//exon//intron       24284625//24209618//24981863 chr11:65351213-65351214(+) m6A CDS//exon//intron       - chr11:65351862-65351863(+) m6A CDS//exon       - chr11:65351925-65351926(+) m6A exon//intron       - chr11:65352721-65352722(+) m6A CDS//intron       24209618//27371828 chr11:65352970-65352971(+) m6A CDS//intron       24209618 chr11:65353003-65353004(+) m6A CDS//intron       24284625//24209618 chr11:65357273-65357274(+) m6A CDS//intron       24284625//24209618 chr11:65357428-65357429(+) m6A CDS//intron       24284625//24209618 chr11:65357570-65357571(+) m6A CDS//intron       24209618 chr11:65357610-65357611(+) m6A CDS//intron       24209618 chr11:65358047-65358048(+) m6A CDS//intron       24209618 chr11:65358677-65358678(+) m6A exon//intron       24209618 chr11:65358702-65358703(+) m6A exon//intron       24209618 chr11:65359446-65359447(+) m6A CDS//exon//intron       - chr11:65359515-65359516(+) m6A CDS//exon       - chr11:65359539-65359540(+) m6A CDS//exon       - chr11:65359545-65359546(+) m6A CDS//exon       - chr11:65360112-65360113(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EHBP1L1	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US22-3p
Interactor2: EHBP1L1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg