Basic Information:

  VIRBase ID:  

VHID00264631

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:  MIMAT0028166          HSPA12B:  NM_001197327     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US22-3p	HSPA12B
miRBase Accession/Entrez ID	MIMAT0028166	116835
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf60

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HSPA12B	chr20:3714695(+) A-I      intronic chr20:3714718(+) A-I      intronic chr20:3715620(+) A-I      intronic chr20:3715553(+) A-I      intronic chr20:3716193(+) A-I      intronic chr20:3714802(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HSPA12B	chr20:3732676-3732677(+) m6A CDS       24209618//24981863 chr20:3732976-3732977(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3732988-3732989(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3733036-3733037(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3733047-3733048(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3733077-3733078(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3733147-3733148(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3733219-3733220(+) m6A 3'UTR       24209618//25456834//24981863 chr20:3733281-3733282(+) m6A 3'UTR       25456834//24981863 chr20:3733313-3733314(+) m6A 3'UTR       25456834//24981863 chr20:3733324-3733325(+) m6A 3'UTR       25456834//24981863 chr20:3733419-3733420(+) m6A 3'UTR       25456834//24981863 chr20:3733465-3733466(+) m6A 3'UTR       24981863 chr20:3733470-3733471(+) m6A 3'UTR       24981863 chr20:3733509-3733510(+) m6A 3'UTR       24981863 chr20:3733624-3733625(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HSPA12B	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US22-3p
Interactor2: HSPA12B

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg