Basic Information:

  VIRBase ID:  

VHID00264616

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:  MIMAT0028166          CYGB:  NM_134268     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US22-3p	CYGB
miRBase Accession/Entrez ID	MIMAT0028166	114757
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HGB//STAP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CYGB	chr17:74528654(-) A-I      intronic chr17:74528697(-) A-I      intronic chr17:74528716(-) A-I      intronic chr17:74528674(-) A-I      intronic chr17:74528668(-) A-I      intronic chr17:74529657(-) A-I      intronic chr17:74529634(-) A-I      intronic chr17:74529622(-) A-I      intronic chr17:74529589(-) A-I      intronic chr17:74529585(-) A-I      intronic chr17:74529556(-) A-I      intronic chr17:74529550(-) A-I      intronic chr17:74528706(-) A-I      intronic chr17:74530319(-) A-I      intronic chr17:74530098(-) A-I      intronic chr17:74530093(-) A-I      intronic chr17:74528681(-) A-I      intronic chr17:74528682(-) A-I      intronic chr17:74528699(-) A-I      intronic chr17:74529991(-) A-I      intronic chr17:74529997(-) A-I      intronic chr17:74530084(-) A-I      intronic chr17:74530542(-) A-I      intronic chr17:74528738(-) A-I      intronic chr17:74530540(-) A-I      intronic chr17:74530425(-) A-I      intronic chr17:74530393(-) A-I      intronic chr17:74529989(-) A-I      intronic chr17:74529932(-) A-I      intronic chr17:74529761(-) A-I      intronic chr17:74529683(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CYGB	chr17:74523474-74523475(-) m6A 3'UTR       27773535 chr17:74523924-74523925(-) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CYGB	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US22-3p
Interactor2: CYGB

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg