Detail Information

Basic Information:


  VIRBase ID:  

VHID00264309

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US22-3p:           ZNF695:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US22-3p ZNF695
miRBase
Accession/Entrez ID
MIMAT0028166 57116
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - SBZF3

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZNF695
chr1:247149645(-) A-I      3'UTR
chr1:247163641(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF695
chr1:247131326-247131327(-) m6A intron       27773535
chr1:247131364-247131365(-) m6A intron       27773535
chr1:247131374-247131375(-) m6A intron       27773535
chr1:247131404-247131405(-) m6A intron       27773535
chr1:247131410-247131411(-) m6A intron       27773535
chr1:247131417-247131418(-) m6A intron       27773535
chr1:247131437-247131438(-) m6A intron       27773535
chr1:247131520-247131521(-) m6A intron       27773535
chr1:247131526-247131527(-) m6A intron       27773535
chr1:247132392-247132393(-) m6A intron       27773535
chr1:247132466-247132467(-) m6A intron       27773535
chr1:247132472-247132473(-) m6A intron       27773535
chr1:247132595-247132596(-) m6A intron       27773535//22608085
chr1:247132602-247132603(-) m6A intron       27773535//22608085
chr1:247132640-247132641(-) m6A intron       27773535//22608085
chr1:247132692-247132693(-) m6A intron       27773535//22608085
chr1:247132734-247132735(-) m6A intron       27773535
chr1:247132776-247132777(-) m6A intron       27773535//22608085
chr1:247132787-247132788(-) m6A intron       25456834//27773535//22608085
chr1:247132812-247132813(-) m6A intron       25456834//27773535//22608085
chr1:247132860-247132861(-) m6A intron       27773535//22608085
chr1:247132903-247132904(-) m6A intron       27773535
chr1:247132936-247132937(-) m6A intron       27773535
chr1:247149782-247149783(-) m6A 3'UTR//intron       27773535//22608085
chr1:247149832-247149833(-) m6A 3'UTR//intron       27773535//22608085
chr1:247149888-247149889(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247149911-247149912(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247149943-247149944(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247149969-247149970(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247149987-247149988(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247150006-247150007(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247150023-247150024(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr1:247150090-247150091(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:247150103-247150104(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22608085
chr1:247150247-247150248(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085
chr1:247150262-247150263(-) m6A 3'UTR//intron       24284625//24981863//27773535//22608085
chr1:247150279-247150280(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr1:247150346-247150347(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:247150366-247150367(-) m6A CDS//intron       24981863//27773535//22608085
chr1:247150373-247150374(-) m6A CDS//intron       24981863//27773535//22608085
chr1:247150430-247150431(-) m6A CDS//intron       27773535//22608085
chr1:247150514-247150515(-) m6A CDS//intron       27773535//22608085
chr1:247150598-247150599(-) m6A CDS//intron       27773535//22608085
chr1:247150682-247150683(-) m6A CDS//intron       24209618//27773535//22608085
chr1:247150709-247150710(-) m6A CDS//intron       24209618//27773535//22608085
chr1:247150765-247150766(-) m6A CDS//intron       27773535//22608085
chr1:247150850-247150851(-) m6A CDS//intron       27773535//22608085
chr1:247150934-247150935(-) m6A CDS//intron       27773535
chr1:247150961-247150962(-) m6A CDS//intron       27773535
chr1:247151017-247151018(-) m6A CDS//intron       27773535//22608085
chr1:247151102-247151103(-) m6A CDS//intron       24981863//27773535//22608085
chr1:247151187-247151188(-) m6A CDS//intron       24284625//24981863//27773535//22608085
chr1:247151270-247151271(-) m6A CDS//intron       27773535//22608085
chr1:247151352-247151353(-) m6A CDS//intron       24981863//27773535//22608085
chr1:247151387-247151388(-) m6A CDS//intron       24981863//27773535//22608085

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF695
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Membrane HCC cell line (HepG2)     -
Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US22-3p
Interactor2: ZNF695

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...