Basic Information:

  VIRBase ID:  

VHID00259758

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          ZNF783:  NM_001195220     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	ZNF783
miRBase Accession/Entrez ID	MIMAT0026628	100289678
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF783	chr7:148974643(+) A-I      intronic chr7:148973060(+) A-I      intronic chr7:148973093(+) A-I      intronic chr7:148974750(+) A-I      intronic chr7:148974014(+) A-I      intronic chr7:148973122(+) A-I      intronic chr7:148973110(+) A-I      intronic chr7:148973142(+) A-I      intronic chr7:148973155(+) A-I      intronic chr7:148974779(+) A-I      intronic chr7:148973067(+) A-I      intronic chr7:148970735(+) A-I      intronic chr7:148974642(+) A-I      intronic chr7:148970747(+) A-I      intronic chr7:148970752(+) A-I      intronic chr7:148970774(+) A-I      intronic chr7:148970792(+) A-I      intronic chr7:148974020(+) A-I      intronic chr7:148972478(+) A-I      intronic chr7:148972483(+) A-I      intronic chr7:148972484(+) A-I      intronic chr7:148974146(+) A-I      intronic chr7:148973120(+) A-I      intronic chr7:148974162(+) A-I      intronic chr7:148972549(+) A-I      intronic chr7:148974554(+) A-I      intronic chr7:148974737(+) A-I      intronic chr7:148969380(+) A-I      intronic chr7:148972545(+) A-I      intronic chr7:148967372(+) A-I      intronic chr7:148961817(+) A-I      intronic chr7:148972543(+) A-I      intronic chr7:148974684(+) A-I      intronic chr7:148968241(+) A-I      intronic chr7:148961892(+) A-I      intronic chr7:148974697(+) A-I      intronic chr7:148970865(+) A-I      intronic chr7:148974568(+) A-I      intronic chr7:148960546(+) A-I      intronic chr7:148974710(+) A-I      intronic chr7:148974775(+) A-I      intronic chr7:148974680(+) A-I      intronic chr7:148974681(+) A-I      intronic chr7:148973813(+) A-I      intronic chr7:148964875(+) A-I      intronic chr7:148974576(+) A-I      intronic chr7:148974558(+) A-I      intronic chr7:148973244(+) A-I      intronic chr7:148974614(+) A-I      intronic chr7:148974628(+) A-I      intronic chr7:148974751(+) A-I      intronic chr7:148960511(+) A-I      intronic chr7:148961952(+) A-I      intronic chr7:148974675(+) A-I      intronic chr7:148972423(+) A-I      intronic chr7:148961748(+) A-I      intronic chr7:148960081(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZNF783	chr7:148963818(+) C-T exon CDS    21725310 chr7:148967359(+) A-G intron -    22484847 chr7:148973202(+) A-G intron -    22484847 chr7:148973785(+) A-G intron -    22484847 chr7:148974711(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF783	chr7:148959394-148959395(+) m6A 5'UTR       22608085 chr7:148963434-148963435(+) m6A CDS       24284625//22575960//22608085 chr7:148963453-148963454(+) m6A CDS       24284625//25456834//22575960//22608085 chr7:148963498-148963499(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:148963566-148963567(+) m1A CDS       26863196 chr7:148963617-148963618(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr7:148963629-148963630(+) m1A CDS       26863196 chr7:148963650-148963651(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:148963669-148963670(+) m6A CDS       24284625//25456834//24981863//22608085 chr7:148963701-148963702(+) m6A CDS       24284625//25456834//22608085 chr7:148963753-148963754(+) m6A CDS       24284625 chr7:148963771-148963772(+) m6A CDS       24284625 chr7:148963973-148963974(+) m6A CDS       24284625 chr7:148964203-148964204(+) m6A CDS       24284625 chr7:148964208-148964209(+) m6A CDS       24284625 chr7:148975306-148975307(+) m6A 5'UTR//exon//intron       24284625 chr7:148975320-148975321(+) m6A 5'UTR//exon//intron       24284625 chr7:148975579-148975580(+) m6A 5'UTR//CDS//exon       24284625 chr7:148978615-148978616(+) m6A CDS//intron       24284625 chr7:148978681-148978682(+) m6A CDS//intron       24284625//25456834//24981863 chr7:148978712-148978713(+) m6A CDS//intron       24284625//25456834//22608085 chr7:148978900-148978901(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr7:148978958-148978959(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr7:148979231-148979232(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr7:148979296-148979297(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr7:148979335-148979336(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr7:148979455-148979456(+) m6A 3'UTR//intron       24284625//25456834//22608085 chr7:148979712-148979713(+) m6A 3'UTR//intron       24981863 chr7:148979751-148979752(+) m6A 3'UTR//intron       24981863 chr7:148979760-148979761(+) m6A 3'UTR//intron       24981863 chr7:148979813-148979814(+) m6A 3'UTR//intron       24981863 chr7:148982021-148982022(+) m6A 3'UTR//intron       - chr7:148982685-148982686(+) m6A intron       25456834 chr7:148982720-148982721(+) m6A intron       25456834 chr7:148982726-148982727(+) m6A intron       25456834 chr7:148984669-148984670(+) m6A 5'UTR//CDS//exon       25456834 chr7:148984761-148984762(+) m6A 3'UTR//CDS//exon       - chr7:148984804-148984805(+) m6A 3'UTR//CDS//exon       - chr7:148984856-148984857(+) m6A 3'UTR//CDS//exon       - chr7:148984887-148984888(+) m6A intron       - chr7:148984939-148984940(+) m6A intron       - chr7:148984957-148984958(+) m6A intron       - chr7:148985540-148985541(+) m6A intron       - chr7:148990558-148990559(+) m6A 3'UTR//CDS//exon       - chr7:148990829-148990830(+) m6A intron       - chr7:148990884-148990885(+) m6A 3'UTR//CDS       - chr7:148990915-148990916(+) m6A 3'UTR//CDS       - chr7:148990921-148990922(+) m6A 3'UTR//CDS       - chr7:148991216-148991217(+) m6A intron       25456834//22608085 chr7:148991234-148991235(+) m6A intron       25456834//22608085 chr7:148991284-148991285(+) m6A intron       25456834//22608085 chr7:148991299-148991300(+) m6A intron       25456834//22608085 chr7:148991311-148991312(+) m6A intron       25456834//22608085 chr7:148991364-148991365(+) m6A intron       25456834//22608085 chr7:148991378-148991379(+) m6A intron       25456834//22608085 chr7:148991472-148991473(+) m6A 3'UTR       - chr7:148991800-148991801(+) m6A 3'UTR       25456834//24981863 chr7:148991869-148991870(+) m6A 3'UTR       25456834//24981863 chr7:148994220-148994221(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:148994233-148994234(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr7:148994275-148994276(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	ZNF783	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: ZNF783

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg