Basic Information:

  VIRBase ID:  

VHID00259750

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          PRCD:  NR_033357     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	PRCD
miRBase Accession/Entrez ID	MIMAT0026628	768206
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	RP36

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRCD	chr17:74523880-74523881(+) m6A exon       - chr17:74523908-74523909(+) m6A exon       - chr17:74534184-74534185(+) m6A exon//intron       - chr17:74534203-74534204(+) m6A exon//intron       - chr17:74534453-74534454(+) m6A exon//intron       - chr17:74534585-74534586(+) m6A exon//intron       - chr17:74536123-74536124(+) m6A 5'UTR//intron       - chr17:74547629-74547630(+) m6A intron       22608085 chr17:74547718-74547719(+) m6A intron       22608085 chr17:74547752-74547753(+) m6A intron       22608085 chr17:74549310-74549311(+) m6A exon       24284625 chr17:74549320-74549321(+) m6A exon       24284625 chr17:74549343-74549344(+) m6A exon       24284625//25456834 chr17:74549356-74549357(+) m6A exon       24284625//25456834 chr17:74549379-74549380(+) m6A exon       24284625//25456834 chr17:74549453-74549454(+) m6A exon       25456834 chr17:74549504-74549505(+) m6A exon       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	PRCD	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: PRCD

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg