Basic Information:

  VIRBase ID:  

VHID00259720

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          ZYG11A:  NM_001307931     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	ZYG11A
miRBase Accession/Entrez ID	MIMAT0026628	440590
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ZYG11

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZYG11A	chr1:53327694(+) A-I      intronic chr1:53359286(+) A-I      3'UTR chr1:53338786(+) A-I      intronic chr1:53328556(+) A-I      intronic chr1:53345547(+) A-I      intronic chr1:53345627(+) A-I      intronic chr1:53330692(+) A-I      intronic chr1:53327716(+) A-I      intronic chr1:53356769(+) A-I      intronic chr1:53349212(+) A-I      intronic chr1:53337900(+) A-I      intronic chr1:53334696(+) A-I      intronic chr1:53320637(+) A-I      intronic chr1:53328311(+) A-I      intronic chr1:53328525(+) A-I      intronic chr1:53327695(+) A-I      intronic chr1:53359203(+) A-I      3'UTR chr1:53327720(+) A-I      intronic chr1:53349240(+) A-I      intronic chr1:53349914(+) A-I      intronic chr1:53349981(+) A-I      intronic chr1:53349983(+) A-I      intronic chr1:53350041(+) A-I      intronic chr1:53350047(+) A-I      intronic chr1:53350118(+) A-I      intronic chr1:53350205(+) A-I      intronic chr1:53350215(+) A-I      intronic chr1:53354264(+) A-I      intronic chr1:53344333(+) A-I      intronic chr1:53340408(+) A-I      intronic chr1:53340377(+) A-I      intronic chr1:53344361(+) A-I      intronic chr1:53340297(+) A-I      intronic chr1:53354292(+) A-I      intronic chr1:53354397(+) A-I      intronic chr1:53355434(+) A-I      intronic chr1:53356436(+) A-I      intronic chr1:53356444(+) A-I      intronic chr1:53339571(+) A-I      intronic chr1:53338920(+) A-I      intronic chr1:53338905(+) A-I      intronic chr1:53338758(+) A-I      intronic chr1:53338737(+) A-I      intronic chr1:53338014(+) A-I      intronic chr1:53337976(+) A-I      intronic chr1:53337915(+) A-I      intronic chr1:53337904(+) A-I      intronic chr1:53314247(+) A-I      intronic chr1:53314459(+) A-I      intronic chr1:53314460(+) A-I      intronic chr1:53317206(+) A-I      intronic chr1:53337899(+) A-I      intronic chr1:53337837(+) A-I      intronic chr1:53337243(+) A-I      intronic chr1:53337190(+) A-I      intronic chr1:53334556(+) A-I      intronic chr1:53323639(+) A-I      intronic chr1:53337188(+) A-I      intronic chr1:53334690(+) A-I      intronic chr1:53334647(+) A-I      intronic chr1:53323642(+) A-I      intronic chr1:53323835(+) A-I      intronic chr1:53327255(+) A-I      intronic chr1:53327738(+) A-I      intronic chr1:53327761(+) A-I      intronic chr1:53328191(+) A-I      intronic chr1:53334198(+) A-I      intronic chr1:53344457(+) A-I      intronic chr1:53334384(+) A-I      intronic chr1:53334276(+) A-I      intronic chr1:53344459(+) A-I      intronic chr1:53344482(+) A-I      intronic chr1:53344507(+) A-I      intronic chr1:53345552(+) A-I      intronic chr1:53345697(+) A-I      intronic chr1:53345732(+) A-I      intronic chr1:53349217(+) A-I      intronic chr1:53349238(+) A-I      intronic chr1:53334274(+) A-I      intronic chr1:53359649(+) A-I      3'UTR chr1:53359658(+) A-I      3'UTR chr1:53359278(+) A-I      3'UTR chr1:53359272(+) A-I      3'UTR chr1:53359650(+) A-I      3'UTR chr1:53359625(+) A-I      3'UTR chr1:53359613(+) A-I      3'UTR chr1:53359587(+) A-I      3'UTR chr1:53359382(+) A-I      3'UTR chr1:53359287(+) A-I      3'UTR chr1:53344391(+) A-I      intronic chr1:53344552(+) A-I      intronic chr1:53344355(+) A-I      intronic chr1:53344450(+) A-I      intronic chr1:53344496(+) A-I      intronic chr1:53344480(+) A-I      intronic chr1:53344452(+) A-I      intronic chr1:53314392(+) A-I      intronic chr1:53344401(+) A-I      intronic chr1:53344410(+) A-I      intronic chr1:53314441(+) A-I      intronic chr1:53344477(+) A-I      intronic chr1:53344464(+) A-I      intronic chr1:53344364(+) A-I      intronic chr1:53344425(+) A-I      intronic chr1:53344560(+) A-I      intronic chr1:53344553(+) A-I      intronic chr1:53344491(+) A-I      intronic chr1:53344451(+) A-I      intronic chr1:53344523(+) A-I      intronic chr1:53316012(+) A-I      intronic chr1:53344409(+) A-I      intronic chr1:53344416(+) A-I      intronic chr1:53344607(+) A-I      intronic chr1:53328113(+) A-I      intronic chr1:53344453(+) A-I      intronic chr1:53344500(+) A-I      intronic chr1:53344490(+) A-I      intronic chr1:53340418(+) A-I      intronic chr1:53356299(+) A-I      intronic chr1:53354215(+) A-I      intronic chr1:53314378(+) A-I      intronic chr1:53356158(+) A-I      intronic chr1:53357664(+) A-I      intronic chr1:53337874(+) A-I      intronic chr1:53327265(+) A-I      intronic chr1:53359261(+) A-I      3'UTR chr1:53338841(+) A-I      intronic chr1:53337956(+) A-I      intronic chr1:53345621(+) A-I      intronic chr1:53344539(+) A-I      intronic chr1:53323922(+) A-I      intronic chr1:53337211(+) A-I      intronic chr1:53337913(+) A-I      intronic chr1:53330429(+) A-I      intronic chr1:53327253(+) A-I      intronic chr1:53338927(+) A-I      intronic chr1:53345688(+) A-I      intronic chr1:53359282(+) A-I      3'UTR chr1:53359291(+) A-I      3'UTR chr1:53350228(+) A-I      intronic chr1:53317860(+) A-I      intronic chr1:53359694(+) A-I      3'UTR chr1:53328648(+) A-I      intronic chr1:53359173(+) A-I      3'UTR chr1:53322043(+) A-I      intronic chr1:53338344(+) A-I      intronic chr1:53338967(+) A-I      intronic chr1:53323693(+) A-I      intronic chr1:53346570(+) A-I      intronic chr1:53340192(+) A-I      intronic chr1:53327526(+) A-I      intronic chr1:53338894(+) A-I      intronic chr1:53349685(+) A-I      intronic chr1:53349913(+) A-I      intronic chr1:53359251(+) A-I      3'UTR chr1:53354219(+) A-I      intronic chr1:53349064(+) A-I      intronic chr1:53337985(+) A-I      intronic chr1:53348906(+) A-I      intronic chr1:53337903(+) A-I      intronic chr1:53338408(+) A-I      intronic chr1:53349169(+) A-I      intronic chr1:53345643(+) A-I      intronic chr1:53328169(+) A-I      intronic chr1:53338767(+) A-I      intronic chr1:53353326(+) A-I      intronic chr1:53337200(+) A-I      intronic chr1:53344517(+) A-I      intronic chr1:53359362(+) A-I      3'UTR chr1:53359163(+) A-I      3'UTR chr1:53359629(+) A-I      3'UTR chr1:53359276(+) A-I      3'UTR chr1:53324033(+) A-I      intronic chr1:53350255(+) A-I      intronic chr1:53328643(+) A-I      intronic chr1:53334339(+) A-I      intronic chr1:53327128(+) A-I      intronic chr1:53338759(+) A-I      intronic chr1:53359181(+) A-I      3'UTR chr1:53359394(+) A-I      3'UTR chr1:53350258(+) A-I      intronic chr1:53334266(+) A-I      intronic chr1:53344356(+) A-I      intronic chr1:53359327(+) A-I      3'UTR chr1:53344543(+) A-I      intronic chr1:53313441(+) A-I      intronic chr1:53320570(+) A-I      intronic chr1:53359745(+) A-I      3'UTR chr1:53359182(+) A-I      3'UTR chr1:53340419(+) A-I      intronic chr1:53323721(+) A-I      intronic chr1:53359665(+) A-I      3'UTR chr1:53327164(+) A-I      intronic chr1:53314243(+) A-I      intronic chr1:53337233(+) A-I      intronic chr1:53346569(+) A-I      intronic chr1:53359421(+) A-I      3'UTR chr1:53338050(+) A-I      intronic chr1:53359258(+) A-I      3'UTR chr1:53359260(+) A-I      3'UTR chr1:53339535(+) A-I      intronic chr1:53359187(+) A-I      3'UTR chr1:53356453(+) A-I      intronic chr1:53359285(+) A-I      3'UTR chr1:53340186(+) A-I      intronic chr1:53359674(+) A-I      3'UTR chr1:53338772(+) A-I      intronic chr1:53340016(+) A-I      intronic chr1:53353303(+) A-I      intronic chr1:53314244(+) A-I      intronic chr1:53359757(+) A-I      3'UTR chr1:53338448(+) A-I      intronic chr1:53334338(+) A-I      intronic chr1:53359311(+) A-I      3'UTR chr1:53344608(+) A-I      intronic chr1:53348858(+) A-I      intronic chr1:53338019(+) A-I      intronic chr1:53349826(+) A-I      intronic chr1:53359275(+) A-I      3'UTR chr1:53323904(+) A-I      intronic chr1:53333658(+) A-I      intronic chr1:53349006(+) A-I      intronic chr1:53359280(+) A-I      3'UTR chr1:53344532(+) A-I      intronic chr1:53313134(+) A-I      intronic chr1:53359682(+) A-I      3'UTR chr1:53356393(+) A-I      intronic chr1:53349732(+) A-I      intronic chr1:53328123(+) A-I      intronic chr1:53356340(+) A-I      intronic chr1:53359726(+) A-I      3'UTR chr1:53340017(+) A-I      intronic chr1:53353291(+) A-I      intronic chr1:53354396(+) A-I      intronic chr1:53338830(+) A-I      intronic chr1:53345587(+) A-I      intronic chr1:53359744(+) A-I      3'UTR chr1:53345580(+) A-I      intronic chr1:53337940(+) A-I      intronic chr1:53337966(+) A-I      intronic chr1:53356300(+) A-I      intronic chr1:53338863(+) A-I      intronic chr1:53339934(+) A-I      intronic chr1:53334445(+) A-I      intronic chr1:53337838(+) A-I      intronic chr1:53354282(+) A-I      intronic chr1:53338298(+) A-I      intronic chr1:53359352(+) A-I      3'UTR chr1:53359259(+) A-I      3'UTR chr1:53344531(+) A-I      intronic chr1:53345577(+) A-I      intronic chr1:53359279(+) A-I      3'UTR chr1:53359277(+) A-I      3'UTR chr1:53334707(+) A-I      intronic chr1:53348895(+) A-I      intronic chr1:53359357(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZYG11A	chr1:53346569(+) A-I intron -    22327324 chr1:53344355(+) A-I intron -    22028664 chr1:53344356(+) A-I intron -    22028664 chr1:53344364(+) A-I intron -    22028664 chr1:53344391(+) A-I intron -    22028664 chr1:53344401(+) A-I intron -    22028664 chr1:53344409(+) A-I intron -    22028664 chr1:53344410(+) A-I intron -    22028664 chr1:53344416(+) A-I intron -    22028664 chr1:53344425(+) A-I intron -    22028664 chr1:53344450(+) A-I intron -    22028664 chr1:53344451(+) A-I intron -    22028664 chr1:53344452(+) A-I intron -    22028664 chr1:53344453(+) A-I intron -    22028664 chr1:53344464(+) A-I intron -    22028664 chr1:53344477(+) A-I intron -    22028664 chr1:53344480(+) A-I intron -    22028664 chr1:53344490(+) A-I intron -    22028664 chr1:53344491(+) A-I intron -    22028664 chr1:53344496(+) A-I intron -    22028664 chr1:53344500(+) A-I intron -    22028664 chr1:53344517(+) A-I intron -    22028664 chr1:53344523(+) A-I intron -    22028664 chr1:53344532(+) A-I intron -    22028664 chr1:53344539(+) A-I intron -    22028664 chr1:53344552(+) A-I intron -    22028664 chr1:53344553(+) A-I intron -    22028664 chr1:53344560(+) A-I intron -    22028664 chr1:53344607(+) A-I intron -    22028664 chr1:53343821(+) A-I intron -    21960545 chr1:53359258(+) A-G intron -    21725310   //22484847 chr1:53346569(+) A-G intron -    22484847 chr1:53346570(+) A-G intron -    22484847 chr1:53314243(+) A-G intron -    22484847 chr1:53314244(+) A-G intron -    22484847 chr1:53314378(+) A-G intron -    22484847 chr1:53314392(+) A-G intron -    22484847 chr1:53320570(+) A-G intron -    22484847 chr1:53328113(+) A-G intron -    22484847 chr1:53328123(+) A-G intron -    22484847 chr1:53328169(+) A-G intron -    22484847 chr1:53330429(+) A-G intron -    22484847 chr1:53333658(+) A-G intron -    22484847 chr1:53334338(+) A-G intron -    22484847 chr1:53334339(+) A-G intron -    22484847 chr1:53337233(+) A-G intron -    22484847 chr1:53337838(+) A-G intron -    22484847 chr1:53337874(+) A-G intron -    22484847 chr1:53337913(+) A-G intron -    22484847 chr1:53337966(+) A-G intron -    22484847 chr1:53337985(+) A-G intron -    22484847 chr1:53338019(+) A-G intron -    22484847 chr1:53338050(+) A-G intron -    22484847 chr1:53338298(+) A-G intron -    22484847 chr1:53338344(+) A-G intron -    22484847 chr1:53338408(+) A-G intron -    22484847 chr1:53339535(+) A-G intron -    22484847 chr1:53339934(+) A-G intron -    22484847 chr1:53340017(+) A-G intron -    22484847 chr1:53340418(+) A-G intron -    22484847 chr1:53340419(+) A-G intron -    22484847 chr1:53345577(+) A-G intron -    22484847 chr1:53345643(+) A-G intron -    22484847 chr1:53348858(+) A-G intron -    22484847 chr1:53348906(+) A-G intron -    22484847 chr1:53349006(+) A-G intron -    22484847 chr1:53349064(+) A-G intron -    22484847 chr1:53349169(+) A-G intron -    22484847 chr1:53349913(+) A-G intron -    22484847 chr1:53350228(+) A-G intron -    22484847 chr1:53350255(+) A-G intron -    22484847 chr1:53350258(+) A-G intron -    22484847 chr1:53353326(+) A-G intron -    22484847 chr1:53354215(+) A-G intron -    22484847 chr1:53354219(+) A-G intron -    22484847 chr1:53354282(+) A-G intron -    22484847 chr1:53356299(+) A-G intron -    22484847 chr1:53356300(+) A-G intron -    22484847 chr1:53357664(+) A-G intron -    22484847 chr1:53359173(+) A-G intron -    22484847 chr1:53359181(+) A-G intron -    22484847 chr1:53359182(+) A-G intron -    22484847 chr1:53359280(+) A-G intron -    22484847 chr1:53359285(+) A-G intron -    22484847 chr1:53359311(+) A-G intron -    22484847 chr1:53359362(+) A-G intron -    22484847 chr1:53359394(+) A-G intron -    22484847 chr1:53359629(+) A-G intron -    22484847 chr1:53359682(+) A-G intron -    22484847 chr1:53359745(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZYG11A	chr1:53322718-53322719(+) m6A CDS//intron       24284625//22608085 chr1:53322799-53322800(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:53322840-53322841(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:53322853-53322854(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr1:53322882-53322883(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr1:53322903-53322904(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr1:53323002-53323003(+) m6A CDS//intron       24284625//22608085 chr1:53323030-53323031(+) m6A CDS//intron       24284625//22608085 chr1:53323174-53323175(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr1:53323227-53323228(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr1:53323324-53323325(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr1:53323363-53323364(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr1:53326457-53326458(+) m6A CDS       24284625//22608085 chr1:53358629-53358630(+) m6A 3'UTR       24284625//22608085 chr1:53358812-53358813(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:53358847-53358848(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:53358853-53358854(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:53358860-53358861(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:53358891-53358892(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:53358924-53358925(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:53358962-53358963(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:53358987-53358988(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr1:53358999-53359000(+) m6A 3'UTR       24284625//25456834//22608085 chr1:53359956-53359957(+) m6A 3'UTR       24981863//27773535//22608085 chr1:53359998-53359999(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:53360051-53360052(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:53360068-53360069(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:53360090-53360091(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr1:53360181-53360182(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	ZYG11A	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: ZYG11A

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg