Basic Information:

  VIRBase ID:  

VHID00259674

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          NAT16:  NM_001369694     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	NAT16
miRBase Accession/Entrez ID	MIMAT0026628	375607
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C7orf52

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NAT16	chr7:100819069(-) A-I      intronic chr7:100819029(-) A-I      intronic chr7:100819006(-) A-I      intronic chr7:100819024(-) A-I      intronic chr7:100819037(-) A-I      intronic chr7:100818666(-) A-I      intronic chr7:100818576(-) A-I      intronic chr7:100818365(-) A-I      intronic chr7:100818660(-) A-I      intronic chr7:100818454(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NAT16	chr7:100813936-100813937(-) m6A 3'UTR       - chr7:100813960-100813961(-) m6A 3'UTR       - chr7:100814952-100814953(-) m6A 3'UTR       24284625 chr7:100815130-100815131(-) m6A 3'UTR       24284625 chr7:100815138-100815139(-) m6A 3'UTR       24284625 chr7:100815164-100815165(-) m6A 3'UTR       24284625 chr7:100815327-100815328(-) m6A 3'UTR       24284625 chr7:100815386-100815387(-) m6A CDS       24284625 chr7:100815413-100815414(-) m6A CDS       24284625 chr7:100817036-100817037(-) m6A 3'UTR//intron       - chr7:100817397-100817398(-) m6A 3'UTR//intron       25456834 chr7:100817557-100817558(-) m6A 3'UTR//intron       25456834 chr7:100817566-100817567(-) m6A 3'UTR//intron       25456834 chr7:100817819-100817820(-) m6A CDS       25456834 chr7:100817855-100817856(-) m6A CDS       25456834 chr7:100817927-100817928(-) m6A CDS       25456834 chr7:100817997-100817998(-) m6A CDS       25456834 chr7:100818027-100818028(-) m6A CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: NAT16

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg