Detail Information

Basic Information:


  VIRBase ID:  

VHID00259658

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:           ZC3H12D:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US4-3p ZC3H12D
miRBase
Accession/Entrez ID		 MIMAT0026628 340152
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - C6orf95//dJ281H8.1//MCPIP4//p34//TFL

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR ZC3H12D
chr6:149779380(-) A-I      intronic
chr6:149779387(-) A-I      intronic
chr6:149779445(-) A-I      intronic
chr6:149779369(-) A-I      intronic
chr6:149779431(-) A-I      intronic
chr6:149779440(-) A-I      intronic
chr6:149788480(-) A-I      intronic
chr6:149779467(-) A-I      intronic
chr6:149779485(-) A-I      intronic
chr6:149779538(-) A-I      intronic
chr6:149787757(-) A-I      intronic
chr6:149787978(-) A-I      intronic
chr6:149787985(-) A-I      intronic
chr6:149788436(-) A-I      intronic
chr6:149788467(-) A-I      intronic
chr6:149787981(-) A-I      intronic
chr6:149800378(-) A-I      intronic
chr6:149800924(-) A-I      intronic
chr6:149797413(-) A-I      intronic
chr6:149791413(-) A-I      intronic
chr6:149791410(-) A-I      intronic
chr6:149790531(-) A-I      intronic
chr6:149786634(-) A-I      intronic
chr6:149790472(-) A-I      intronic
chr6:149790404(-) A-I      intronic
chr6:149789363(-) A-I      intronic
chr6:149802650(-) A-I      intronic
chr6:149788609(-) A-I      intronic
chr6:149797596(-) A-I      intronic
chr6:149800911(-) A-I      intronic
chr6:149800906(-) A-I      intronic
chr6:149789320(-) A-I      intronic
chr6:149789311(-) A-I      intronic
chr6:149797469(-) A-I      intronic
chr6:149789246(-) A-I      intronic
chr6:149789183(-) A-I      intronic
chr6:149788662(-) A-I      intronic
chr6:149769592(-) A-I      3'UTR
chr6:149770468(-) A-I      3'UTR
chr6:149770558(-) A-I      3'UTR
chr6:149770670(-) A-I      3'UTR
chr6:149769316(-) A-I      3'UTR
chr6:149769193(-) A-I      3'UTR
chr6:149770680(-) A-I      3'UTR
chr6:149770702(-) A-I      3'UTR
chr6:149769505(-) A-I      3'UTR
chr6:149770821(-) A-I      3'UTR
chr6:149770802(-) A-I      3'UTR
chr6:149770848(-) A-I      3'UTR
chr6:149770742(-) A-I      3'UTR
chr6:149770743(-) A-I      3'UTR
chr6:149770825(-) A-I      3'UTR
chr6:149770769(-) A-I      3'UTR
chr6:149770695(-) A-I      3'UTR
chr6:149769325(-) A-I      3'UTR
chr6:149770778(-) A-I      3'UTR
chr6:149770856(-) A-I      3'UTR
chr6:149770779(-) A-I      3'UTR
chr6:149769560(-) A-I      3'UTR
chr6:149770745(-) A-I      3'UTR
chr6:149769567(-) A-I      3'UTR
chr6:149781575(-) A-I      intronic
chr6:149779254(-) A-I      intronic
chr6:149789406(-) A-I      intronic
chr6:149779499(-) A-I      intronic
chr6:149791589(-) A-I      intronic
chr6:149781610(-) A-I      intronic
chr6:149787929(-) A-I      intronic
chr6:149782394(-) A-I      intronic
chr6:149800311(-) A-I      intronic
chr6:149781883(-) A-I      intronic
chr6:149781844(-) A-I      intronic
chr6:149770493(-) A-I      3'UTR
chr6:149769557(-) A-I      3'UTR
chr6:149770754(-) A-I      3'UTR
chr6:149770847(-) A-I      3'UTR
chr6:149770738(-) A-I      3'UTR
chr6:149770866(-) A-I      3'UTR
chr6:149770539(-) A-I      3'UTR
chr6:149769638(-) A-I      3'UTR
chr6:149770698(-) A-I      3'UTR
chr6:149770547(-) A-I      3'UTR
chr6:149770641(-) A-I      3'UTR
chr6:149770497(-) A-I      3'UTR
chr6:149769579(-) A-I      3'UTR
chr6:149769261(-) A-I      3'UTR
chr6:149769236(-) A-I      3'UTR
chr6:149770748(-) A-I      3'UTR
chr6:149769368(-) A-I      3'UTR
chr6:149769537(-) A-I      3'UTR
chr6:149770544(-) A-I      3'UTR
chr6:149769492(-) A-I      3'UTR
chr6:149770574(-) A-I      3'UTR
chr6:149770512(-) A-I      3'UTR
chr6:149770631(-) A-I      3'UTR
chr6:149770712(-) A-I      3'UTR
chr6:149770646(-) A-I      3'UTR
chr6:149770751(-) A-I      3'UTR
chr6:149770518(-) A-I      3'UTR
chr6:149769162(-) A-I      3'UTR
chr6:149769596(-) A-I      3'UTR
chr6:149770753(-) A-I      3'UTR
chr6:149769424(-) A-I      3'UTR
chr6:149770528(-) A-I      3'UTR
chr6:149769204(-) A-I      3'UTR
chr6:149769244(-) A-I      3'UTR
chr6:149770768(-) A-I      3'UTR
chr6:149769183(-) A-I      3'UTR
chr6:149770566(-) A-I      3'UTR
chr6:149769258(-) A-I      3'UTR
chr6:149770734(-) A-I      3'UTR
chr6:149779357(-) A-I      intronic
chr6:149781930(-) A-I      intronic
chr6:149800411(-) A-I      intronic
chr6:149779351(-) A-I      intronic
chr6:149779475(-) A-I      intronic
chr6:149802681(-) A-I      intronic
chr6:149774909(-) A-I      intronic
chr6:149802685(-) A-I      intronic
chr6:149779410(-) A-I      intronic
chr6:149802718(-) A-I      intronic
chr6:149788427(-) A-I      intronic
chr6:149787899(-) A-I      intronic
chr6:149781581(-) A-I      intronic
chr6:149781587(-) A-I      intronic
chr6:149797787(-) A-I      intronic
chr6:149804835(-) A-I      intronic
chr6:149802587(-) A-I      intronic
chr6:149788517(-) A-I      intronic
chr6:149779544(-) A-I      intronic
chr6:149779496(-) A-I      intronic
chr6:149774595(-) A-I      intronic
chr6:149791640(-) A-I      intronic
chr6:149797733(-) A-I      intronic
chr6:149779473(-) A-I      intronic
chr6:149789389(-) A-I      intronic
chr6:149782297(-) A-I      intronic
chr6:149779444(-) A-I      intronic
chr6:149779262(-) A-I      intronic
chr6:149779374(-) A-I      intronic
chr6:149781628(-) A-I      intronic
chr6:149783378(-) A-I      intronic
chr6:149779393(-) A-I      intronic
chr6:149787930(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZC3H12D
chr6:149769638(-) A-I exon 3'UTR    15258596
chr6:149770518(-) A-I exon 3'UTR    15258596   //22327324
chr6:149770539(-) A-I exon 3'UTR    15258596   //22327324
chr6:149770544(-) A-I exon 3'UTR    15258596
chr6:149770547(-) A-I exon 3'UTR    15258596
chr6:149770566(-) A-I exon 3'UTR    15258596
chr6:149770574(-) A-I exon 3'UTR    15258596
chr6:149770631(-) A-I exon 3'UTR    15258596
chr6:149770698(-) A-I exon 3'UTR    15258596
chr6:149770712(-) A-I exon 3'UTR    15258596
chr6:149770734(-) A-I exon 3'UTR    15258596
chr6:149769236(-) A-I exon 3'UTR    22327324
chr6:149769236(-) A-G exon 3'UTR    21725310   //22484847
chr6:149770847(-) A-G exon 3'UTR    21725310   //22484847
chr6:149769171(-) A-G exon 3'UTR    22484847
chr6:149769317(-) A-G exon 3'UTR    22484847
chr6:149769349(-) A-G exon 3'UTR    22484847
chr6:149769368(-) A-G exon 3'UTR    22484847
chr6:149769533(-) A-G exon 3'UTR    22484847
chr6:149769537(-) A-G exon 3'UTR    22484847
chr6:149769593(-) A-G exon 3'UTR    22484847
chr6:149769622(-) A-G exon 3'UTR    22484847
chr6:149769638(-) A-G exon 3'UTR    22484847
chr6:149770497(-) A-G exon 3'UTR    22484847
chr6:149770518(-) A-G exon 3'UTR    22484847
chr6:149770539(-) A-G exon 3'UTR    22484847
chr6:149770544(-) A-G exon 3'UTR    22484847
chr6:149770566(-) A-G exon 3'UTR    22484847
chr6:149770574(-) A-G exon 3'UTR    22484847
chr6:149770612(-) A-G exon 3'UTR    22484847
chr6:149770631(-) A-G exon 3'UTR    22484847
chr6:149770646(-) A-G exon 3'UTR    22484847
chr6:149770671(-) A-G exon 3'UTR    22484847
chr6:149770712(-) A-G exon 3'UTR    22484847
chr6:149770738(-) A-G exon 3'UTR    22484847
chr6:149770748(-) A-G exon 3'UTR    22484847
chr6:149770751(-) A-G exon 3'UTR    22484847
chr6:149770752(-) A-G exon 3'UTR    22484847
chr6:149770757(-) A-G exon 3'UTR    22484847
chr6:149770768(-) A-G exon 3'UTR    22484847
chr6:149777009(-) T-C intron -    22484847
chr6:149777386(-) A-T intron -    22484847
chr6:149777387(-) G-T intron -    22484847
chr6:149777389(-) T-A intron -    22484847
chr6:149779259(-) G-A intron -    22484847
chr6:149779260(-) C-A intron -    22484847
chr6:149781844(-) A-G intron -    22484847
chr6:149781883(-) A-G intron -    22484847
chr6:149782394(-) A-G intron -    22484847
chr6:149787888(-) A-G intron -    22484847
chr6:149787890(-) A-G intron -    22484847
chr6:149787899(-) A-G intron -    22484847
chr6:149787900(-) A-G intron -    22484847
chr6:149787929(-) A-G intron -    22484847
chr6:149787930(-) A-G intron -    22484847
chr6:149789389(-) A-G intron -    22484847
chr6:149789406(-) A-G intron -    22484847
chr6:149791640(-) A-G intron -    22484847
chr6:149791683(-) A-T intron -    22484847
chr6:149800311(-) A-G intron -    22484847
chr6:149800925(-) A-G intron -    22484847
chr6:149800933(-) A-G intron -    22484847
chr6:149802718(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZC3H12D
chr6:149770887-149770888(-) m6A 3'UTR       27773535
chr6:149771022-149771023(-) m6A 3'UTR       27773535
chr6:149771091-149771092(-) m6A 3'UTR       27773535
chr6:149771161-149771162(-) m6A 3'UTR       27773535
chr6:149771346-149771347(-) m6A 3'UTR       26404942//27773535
chr6:149771432-149771433(-) m6A 3'UTR       24284625//28052920//26404942//27773535
chr6:149771472-149771473(-) m6A 3'UTR       24284625//28052920//26404942//27773535//27371828
chr6:149771478-149771479(-) m6A 3'UTR       24284625//28052920//26404942//27773535//27371828
chr6:149771487-149771488(-) m6A 3'UTR       24284625//28052920//26404942//27773535//27371828
chr6:149771533-149771534(-) m6A 3'UTR       28052920//26404942//27773535//27371828
chr6:149771557-149771558(-) m6A 3'UTR       28052920//26404942//27773535//27371828
chr6:149771738-149771739(-) m6A 3'UTR       28052920//27371828
chr6:149771758-149771759(-) m6A 3'UTR       28052920//27371828
chr6:149771814-149771815(-) m6A 3'UTR       24284625//28052920//27371828
chr6:149771885-149771886(-) m6A CDS       28052920//26404942//27371828
chr6:149771918-149771919(-) m6A CDS       28052920//26404942//27371828
chr6:149772010-149772011(-) m6A CDS       28052920//27371828
chr6:149772140-149772141(-) m6A CDS       27371828
chr6:149772154-149772155(-) m6A CDS       27371828
chr6:149772389-149772390(-) m6A CDS       27371828
chr6:149772430-149772431(-) m6A CDS       27371828
chr6:149795706-149795707(-) m6A 5'UTR//exon       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US4-3p
Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
ZC3H12D
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US4-3p
Interactor2: ZC3H12D

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

Starting a new search, please wait ...