Basic Information:

  VIRBase ID:  

VHID00259603

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          ADGRF1:  NM_153840     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	ADGRF1
miRBase Accession/Entrez ID	MIMAT0026628	266977
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GPR110//hGPCR36//KPG_012//PGR19

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADGRF1	chr6:46990610(-) A-I      intronic chr6:46990584(-) A-I      intronic chr6:46988149(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADGRF1	chr6:46976897-46976898(-) m6A CDS//exon       27773535 chr6:46976944-46976945(-) m6A CDS//exon       27773535 chr6:46977215-46977216(-) m6A CDS//exon       27773535 chr6:46977227-46977228(-) m6A CDS//exon       27773535 chr6:46977284-46977285(-) m6A CDS//exon       27773535 chr6:46977315-46977316(-) m6A CDS//exon       27773535 chr6:46977587-46977588(-) m6A CDS//exon       27773535 chr6:46977635-46977636(-) m6A CDS//exon       27773535 chr6:46977661-46977662(-) m6A CDS//exon       27773535 chr6:46977704-46977705(-) m6A CDS//exon       27773535 chr6:46977738-46977739(-) m6A CDS//exon       27773535 chr6:46977764-46977765(-) m6A CDS//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	ADGRF1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: ADGRF1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg