Detail Information

Basic Information:


  VIRBase ID:  

VHID00259600

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:           SEC14L3:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US4-3p SEC14L3
miRBase
Accession/Entrez ID
MIMAT0026628 266629
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - TAP2

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SEC14L3
chr22:30844636(-) A-I      3'UTR
chr22:30844615(-) A-I      3'UTR
chr22:30844640(-) A-I      3'UTR
chr22:30844637(-) A-I      3'UTR
chr22:30844641(-) A-I      3'UTR
chr22:30844655(-) A-I      3'UTR
chr22:30844603(-) A-I      3'UTR
chr22:30844751(-) A-I      3'UTR
chr22:30864023(-) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US4-3p
Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
SEC14L3
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US4-3p
Interactor2: SEC14L3

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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