Basic Information:

  VIRBase ID:  

VHID00259571

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          SP8:  NM_182700     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	SP8
miRBase Accession/Entrez ID	MIMAT0026628	221833
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BTD

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SP8	chr7:20824156-20824157(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085 chr7:20824273-20824274(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085 chr7:20824503-20824504(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085 chr7:20824657-20824658(-) m6A CDS       24284625//24209618//25456834//24981863//27773536//22608085 chr7:20824710-20824711(-) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr7:20824716-20824717(-) m6A CDS       24209618//25456834//24981863//27773536//22608085 chr7:20825319-20825320(-) m6A CDS       25456834//24981863//27773535 chr7:20825408-20825409(-) m6A 5'UTR//CDS       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	SP8	Exosome Serum     - Nucleolus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: SP8

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg