Basic Information:

  VIRBase ID:  

VHID00259501

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          MCMDC2:  NM_001136161     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	MCMDC2
miRBase Accession/Entrez ID	MIMAT0026628	157777
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C8orf45

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MCMDC2	chr8:67797051(+) A-I      intronic chr8:67818109(+) A-I      intronic chr8:67818119(+) A-I      intronic chr8:67798614(+) A-I      intronic chr8:67798779(+) A-I      intronic chr8:67818093(+) A-I      intronic chr8:67826046(+) A-I      intronic chr8:67797123(+) A-I      intronic chr8:67794727(+) A-I      intronic chr8:67826038(+) A-I      intronic chr8:67822965(+) A-I      intronic chr8:67818030(+) A-I      intronic chr8:67788984(+) A-I      intronic chr8:67789838(+) A-I      intronic chr8:67819133(+) A-I      intronic chr8:67818192(+) A-I      intronic chr8:67817987(+) A-I      intronic chr8:67797031(+) A-I      intronic chr8:67818065(+) A-I      intronic chr8:67818160(+) A-I      intronic chr8:67797556(+) A-I      intronic chr8:67801923(+) A-I      intronic chr8:67797151(+) A-I      intronic chr8:67819092(+) A-I      intronic chr8:67797035(+) A-I      intronic chr8:67818161(+) A-I      intronic chr8:67819137(+) A-I      intronic chr8:67797070(+) A-I      intronic chr8:67789027(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MCMDC2	chr8:67834183-67834184(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	MCMDC2	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: MCMDC2

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg