Detail Information

Basic Information:


  VIRBase ID:  

VHID00259459

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:           PNCK:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US4-3p PNCK
miRBase
Accession/Entrez ID
MIMAT0026628 139728
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - BSTK3//CaMK1b

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PNCK
chrX:152937214-152937215(-) m6A exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate hcmv-miR-US4-3p
Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
PNCK
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US4-3p
Interactor2: PNCK

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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