Basic Information:

  VIRBase ID:  

VHID00259412

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          TMEM266:  NM_152335     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	TMEM266
miRBase Accession/Entrez ID	MIMAT0026628	123591
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C15orf27//HsHVRP1//hTMEM266//HVRP1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM266	chr15:76423593(+) A-I      intronic chr15:76423581(+) A-I      intronic chr15:76423587(+) A-I      intronic chr15:76423604(+) A-I      intronic chr15:76423577(+) A-I      intronic chr15:76423561(+) A-I      intronic chr15:76423597(+) A-I      intronic chr15:76423588(+) A-I      intronic chr15:76460008(+) A-I      intronic chr15:76460043(+) A-I      intronic chr15:76475657(+) A-I      intronic chr15:76475666(+) A-I      intronic chr15:76365145(+) A-I      intronic chr15:76365160(+) A-I      intronic chr15:76365163(+) A-I      intronic chr15:76365168(+) A-I      intronic chr15:76369367(+) A-I      intronic chr15:76369370(+) A-I      intronic chr15:76371532(+) A-I      intronic chr15:76371533(+) A-I      intronic chr15:76372776(+) A-I      intronic chr15:76372790(+) A-I      intronic chr15:76376524(+) A-I      intronic chr15:76376534(+) A-I      intronic chr15:76377679(+) A-I      intronic chr15:76460051(+) A-I      intronic chr15:76384092(+) A-I      intronic chr15:76384129(+) A-I      intronic chr15:76384148(+) A-I      intronic chr15:76402186(+) A-I      intronic chr15:76402191(+) A-I      intronic chr15:76402441(+) A-I      intronic chr15:76410752(+) A-I      intronic chr15:76410756(+) A-I      intronic chr15:76416282(+) A-I      intronic chr15:76416288(+) A-I      intronic chr15:76459907(+) A-I      intronic chr15:76459942(+) A-I      intronic chr15:76384176(+) A-I      intronic chr15:76369369(+) A-I      intronic chr15:76381663(+) A-I      intronic chr15:76381673(+) A-I      intronic chr15:76410665(+) A-I      intronic chr15:76373371(+) A-I      intronic chr15:76377507(+) A-I      intronic chr15:76433854(+) A-I      intronic chr15:76398976(+) A-I      intronic chr15:76397476(+) A-I      intronic chr15:76459611(+) A-I      intronic chr15:76364518(+) A-I      intronic chr15:76372842(+) A-I      intronic chr15:76481335(+) A-I      intronic chr15:76460116(+) A-I      intronic chr15:76364658(+) A-I      intronic chr15:76460017(+) A-I      intronic chr15:76381660(+) A-I      intronic chr15:76430285(+) A-I      intronic chr15:76402104(+) A-I      intronic chr15:76384128(+) A-I      intronic chr15:76364525(+) A-I      intronic chr15:76481343(+) A-I      intronic chr15:76394925(+) A-I      intronic chr15:76397299(+) A-I      intronic chr15:76401065(+) A-I      intronic chr15:76380876(+) A-I      intronic chr15:76364516(+) A-I      intronic chr15:76381201(+) A-I      intronic chr15:76376532(+) A-I      intronic chr15:76440219(+) A-I      intronic chr15:76459632(+) A-I      intronic chr15:76373136(+) A-I      intronic chr15:76405556(+) A-I      intronic chr15:76378278(+) A-I      intronic chr15:76370103(+) A-I      intronic chr15:76450190(+) A-I      intronic chr15:76378268(+) A-I      intronic chr15:76377780(+) A-I      intronic chr15:76382575(+) A-I      intronic chr15:76401062(+) A-I      intronic chr15:76376472(+) A-I      intronic chr15:76376594(+) A-I      intronic chr15:76373188(+) A-I      intronic chr15:76473055(+) A-I      intronic chr15:76433670(+) A-I      intronic chr15:76416907(+) A-I      intronic chr15:76378410(+) A-I      intronic chr15:76397305(+) A-I      intronic chr15:76435971(+) A-I      intronic chr15:76459972(+) A-I      intronic chr15:76381808(+) A-I      intronic chr15:76401866(+) A-I      intronic chr15:76373132(+) A-I      intronic chr15:76368409(+) A-I      intronic chr15:76384257(+) A-I      intronic chr15:76364797(+) A-I      intronic chr15:76433657(+) A-I      intronic chr15:76372036(+) A-I      intronic chr15:76373157(+) A-I      intronic chr15:76377574(+) A-I      intronic chr15:76460104(+) A-I      intronic chr15:76418074(+) A-I      intronic chr15:76377783(+) A-I      intronic chr15:76364659(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM266	chr15:76494566-76494567(+) m6A 3'UTR//CDS//exon       - chr15:76496132-76496133(+) m6A 3'UTR//CDS//exon       24284625//25456834//22608085 chr15:76496159-76496160(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085 chr15:76496174-76496175(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085 chr15:76496187-76496188(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085 chr15:76496288-76496289(+) m6A 3'UTR//CDS//exon       24284625//25456834//22608085 chr15:76496384-76496385(+) m6A 3'UTR//CDS//exon       25456834 chr15:76496408-76496409(+) m6A 3'UTR//CDS//exon       25456834 chr15:76496435-76496436(+) m6A 3'UTR//CDS//exon       25456834 chr15:76496479-76496480(+) m6A 3'UTR//CDS//exon       25456834 chr15:76496597-76496598(+) m6A 3'UTR//CDS//exon//intron       - chr15:76496688-76496689(+) m6A 3'UTR//exon//intron       25456834//22608085 chr15:76496713-76496714(+) m6A 3'UTR//exon//intron       25456834//22608085 chr15:76496826-76496827(+) m6A 3'UTR//exon//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	TMEM266	Chromatin K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: TMEM266

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg