Basic Information:

  VIRBase ID:  

VHID00257988

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US4-3p:  MIMAT0026628          KCNF1:  NM_002236     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US4-3p	KCNF1
miRBase Accession/Entrez ID	MIMAT0026628	3754
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	IK8//KCNF//kH1//KV5.1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KCNF1	chr2:11052156-11052157(+) m6A 5'UTR       24981863 chr2:11052216-11052217(+) m6A 5'UTR       - chr2:11052892-11052893(+) m6A CDS       - chr2:11052907-11052908(+) m6A CDS       25456834 chr2:11053318-11053319(+) m6A CDS       24981863 chr2:11053485-11053486(+) m6A CDS       24981863 chr2:11053520-11053521(+) m6A CDS       24981863 chr2:11053605-11053606(+) m6A CDS       24981863 chr2:11053689-11053690(+) m6A CDS       24981863 chr2:11053812-11053813(+) m6A CDS       24981863 chr2:11053844-11053845(+) m6A CDS       24981863 chr2:11053875-11053876(+) m6A CDS       25456834//24981863 chr2:11053900-11053901(+) m6A CDS       25456834//24981863 chr2:11054013-11054014(+) m6A CDS       25456834//24981863 chr2:11054063-11054064(+) m6A 3'UTR       25456834//24981863 chr2:11054075-11054076(+) m6A 3'UTR       25456834//24981863 chr2:11054151-11054152(+) m6A 3'UTR       25456834//24981863 chr2:11054197-11054198(+) m6A 3'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	hcmv-miR-US4-3p	Exosome B cell line (Raji)|Primary dendritic cells|T cell line (J77)     21505438
	KCNF1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US4-3p
Interactor2: KCNF1

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg