Detail Information

Basic Information:


  VIRBase ID:  

VHID00257115

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US5-2-5p:           DNAH9:      

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Interactor Information:


Interactor1 Interactor2
Symbol hcmv-miR-US5-2-5p DNAH9
miRBase
Accession/Entrez ID
MIMAT0026553 1770
Organism Human betaherpesvirus 5 (HHV-5) Homo sapiens
Category miRNA mRNA
Alias - CILD40//DNAH17L//Dnahc9//DNEL1//DYH9//HL-20//HL20

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DNAH9
chr17:11701586(+) A-I      intronic
chr17:11651609(+) A-I      intronic
chr17:11651627(+) A-I      intronic
chr17:11701587(+) A-I      intronic
chr17:11701598(+) A-I      intronic
chr17:11863519(+) A-I      intronic
chr17:11721531(+) A-I      intronic
chr17:11721530(+) A-I      intronic
chr17:11682134(+) A-I      intronic
chr17:11682133(+) A-I      intronic
chr17:11781303(+) A-I      intronic
chr17:11681544(+) A-I      intronic
chr17:11737540(+) A-I      intronic
chr17:11846818(+) A-I      intronic
chr17:11846832(+) A-I      intronic
chr17:11682306(+) A-I      intronic
chr17:11591203(+) A-I      intronic
chr17:11541763(+) A-I      intronic
chr17:11846982(+) A-I      intronic
chr17:11516684(+) A-I      intronic
chr17:11651523(+) A-I      intronic
chr17:11789670(+) A-I      intronic
chr17:11816356(+) A-I      intronic
chr17:11780058(+) A-I      intronic
chr17:11701635(+) A-I      intronic
chr17:11523253(+) A-I      intronic
chr17:11591230(+) A-I      intronic
chr17:11846779(+) A-I      intronic
chr17:11846807(+) A-I      intronic
chr17:11701700(+) A-I      intronic
chr17:11533629(+) A-I      intronic
chr17:11651631(+) A-I      intronic
chr17:11682312(+) A-I      intronic
chr17:11846793(+) A-I      intronic
chr17:11533656(+) A-I      intronic
chr17:11846740(+) A-I      intronic
chr17:11509111(+) A-I      intronic
chr17:11651639(+) A-I      intronic
chr17:11780518(+) A-I      intronic
chr17:11550620(+) A-I      intronic
chr17:11684988(+) A-I      intronic
chr17:11652433(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DNAH9
chr17:11501868-11501869(+) m6A CDS//exon       -
chr17:11501902-11501903(+) m6A CDS//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DNAH9
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hcmv-miR-US5-2-5p
Interactor2: DNAH9

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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