Basic Information:

  VIRBase ID:  

VHID00256891

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          PRRC2B:  NM_001384818     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	PRRC2B
miRBase Accession/Entrez ID	MIMAT0026552	84726
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BAT2L//BAT2L1//KIAA0515//LQFBS-1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PRRC2B	chr9:134337067(+) A-I      intronic chr9:134337055(+) A-I      intronic chr9:134331064(+) A-I      intronic chr9:134331055(+) A-I      intronic chr9:134331042(+) A-I      intronic chr9:134316346(+) A-I      intronic chr9:134316337(+) A-I      intronic chr9:134316301(+) A-I      intronic chr9:134316291(+) A-I      intronic chr9:134337108(+) A-I      intronic chr9:134315224(+) A-I      intronic chr9:134337029(+) A-I      intronic chr9:134330123(+) A-I      intronic chr9:134356716(+) A-I      intronic chr9:134356603(+) A-I      intronic chr9:134356593(+) A-I      intronic chr9:134338104(+) A-I      intronic chr9:134337977(+) A-I      intronic chr9:134337971(+) A-I      intronic chr9:134337965(+) A-I      intronic chr9:134337877(+) A-I      intronic chr9:134337797(+) A-I      intronic chr9:134337757(+) A-I      intronic chr9:134337699(+) A-I      intronic chr9:134337693(+) A-I      intronic chr9:134337680(+) A-I      intronic chr9:134337111(+) A-I      intronic chr9:134337033(+) A-I      intronic chr9:134337028(+) A-I      intronic chr9:134331897(+) A-I      intronic chr9:134331871(+) A-I      intronic chr9:134331857(+) A-I      intronic chr9:134331420(+) A-I      intronic chr9:134331406(+) A-I      intronic chr9:134331347(+) A-I      intronic chr9:134330973(+) A-I      intronic chr9:134326756(+) A-I      intronic chr9:134326746(+) A-I      intronic chr9:134326735(+) A-I      intronic chr9:134326731(+) A-I      intronic chr9:134326706(+) A-I      intronic chr9:134326671(+) A-I      intronic chr9:134326639(+) A-I      intronic chr9:134326609(+) A-I      intronic chr9:134326599(+) A-I      intronic chr9:134326569(+) A-I      intronic chr9:134325819(+) A-I      intronic chr9:134325790(+) A-I      intronic chr9:134325691(+) A-I      intronic chr9:134325674(+) A-I      intronic chr9:134323880(+) A-I      intronic chr9:134323846(+) A-I      intronic chr9:134323837(+) A-I      intronic chr9:134323788(+) A-I      intronic chr9:134323784(+) A-I      intronic chr9:134323780(+) A-I      intronic chr9:134323779(+) A-I      intronic chr9:134323775(+) A-I      intronic chr9:134323754(+) A-I      intronic chr9:134323721(+) A-I      intronic chr9:134323715(+) A-I      intronic chr9:134323708(+) A-I      intronic chr9:134318920(+) A-I      intronic chr9:134318799(+) A-I      intronic chr9:134317685(+) A-I      intronic chr9:134317659(+) A-I      intronic chr9:134317619(+) A-I      intronic chr9:134316876(+) A-I      intronic chr9:134316384(+) A-I      intronic chr9:134316377(+) A-I      intronic chr9:134316325(+) A-I      intronic chr9:134316272(+) A-I      intronic chr9:134315576(+) A-I      intronic chr9:134315529(+) A-I      intronic chr9:134315323(+) A-I      intronic chr9:134315262(+) A-I      intronic chr9:134315260(+) A-I      intronic chr9:134315233(+) A-I      intronic chr9:134311624(+) A-I      intronic chr9:134310973(+) A-I      intronic chr9:134310957(+) A-I      intronic chr9:134310934(+) A-I      intronic chr9:134310933(+) A-I      intronic chr9:134310565(+) A-I      intronic chr9:134310534(+) A-I      intronic chr9:134310514(+) A-I      intronic chr9:134323851(+) A-I      intronic chr9:134325804(+) A-I      intronic chr9:134325719(+) A-I      intronic chr9:134330185(+) A-I      intronic chr9:134318844(+) A-I      intronic chr9:134316844(+) A-I      intronic chr9:134331488(+) A-I      intronic chr9:134331036(+) A-I      intronic chr9:134334119(+) A-I      intronic chr9:134318921(+) A-I      intronic chr9:134356325(+) A-I      intronic chr9:134328943(+) A-I      intronic chr9:134318933(+) A-I      intronic chr9:134338131(+) A-I      intronic chr9:134331515(+) A-I      intronic chr9:134326532(+) A-I      intronic chr9:134316812(+) A-I      intronic chr9:134323852(+) A-I      intronic chr9:134356300(+) A-I      intronic chr9:134331489(+) A-I      intronic chr9:134310923(+) A-I      intronic chr9:134334891(+) A-I      intronic chr9:134331353(+) A-I      intronic chr9:134316404(+) A-I      intronic chr9:134319007(+) A-I      intronic chr9:134326531(+) A-I      intronic chr9:134331137(+) A-I      intronic chr9:134356022(+) A-I      intronic chr9:134331487(+) A-I      intronic chr9:134326570(+) A-I      intronic chr9:134326104(+) A-I      intronic chr9:134329103(+) A-I      intronic chr9:134335188(+) A-I      intronic chr9:134326607(+) A-I      intronic chr9:134323810(+) A-I      intronic chr9:134326006(+) A-I      intronic chr9:134356021(+) A-I      intronic chr9:134330295(+) A-I      intronic chr9:134326675(+) A-I      intronic chr9:134330981(+) A-I      intronic chr9:134337786(+) A-I      intronic chr9:134337783(+) A-I      intronic chr9:134337117(+) A-I      intronic chr9:134326101(+) A-I      intronic chr9:134315354(+) A-I      intronic chr9:134337868(+) A-I      intronic chr9:134337874(+) A-I      intronic chr9:134338118(+) A-I      intronic chr9:134334158(+) A-I      intronic chr9:134323683(+) A-I      intronic chr9:134310882(+) A-I      intronic chr9:134337703(+) A-I      intronic chr9:134338114(+) A-I      intronic chr9:134335126(+) A-I      intronic chr9:134316845(+) A-I      intronic chr9:134316367(+) A-I      intronic chr9:134316823(+) A-I      intronic chr9:134323693(+) A-I      intronic chr9:134317620(+) A-I      intronic chr9:134330197(+) A-I      intronic chr9:134306702(+) A-I      intronic chr9:134337623(+) A-I      intronic chr9:134319086(+) A-I      intronic chr9:134330122(+) A-I      intronic chr9:134325725(+) A-I      intronic chr9:134338075(+) A-I      intronic chr9:134329100(+) A-I      intronic chr9:134323970(+) A-I      intronic chr9:134330392(+) A-I      intronic chr9:134328963(+) A-I      intronic chr9:134331028(+) A-I      intronic chr9:134334874(+) A-I      intronic chr9:134335109(+) A-I      intronic chr9:134326692(+) A-I      intronic chr9:134318601(+) A-I      intronic chr9:134325678(+) A-I      intronic chr9:134318950(+) A-I      intronic chr9:134310891(+) A-I      intronic chr9:134316896(+) A-I      intronic chr9:134334090(+) A-I      intronic chr9:134315721(+) A-I      intronic chr9:134326149(+) A-I      intronic chr9:134328945(+) A-I      intronic chr9:134331350(+) A-I      intronic chr9:134319054(+) A-I      intronic chr9:134324790(+) A-I      intronic chr9:134337800(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PRRC2B	chr9:134373264(+) A-I intron -    22327324 chr9:134316850(+) A-I intron -    21960545 chr9:134356073(+) A-I intron -    21960545 chr9:134316395(+) A-G intron -    22484847 chr9:134364693(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PRRC2B	chr9:134269640-134269641(+) m6A 5'UTR       24209618 chr9:134269645-134269646(+) m6A 5'UTR       24209618 chr9:134305565-134305566(+) Am CDS       - chr9:134308072-134308073(+) m6A CDS       22575960 chr9:134308096-134308097(+) m6A CDS       24981863//22575960 chr9:134308153-134308154(+) m6A CDS       24981863//22575960 chr9:134308171-134308172(+) m6A CDS       24981863//22575960 chr9:134312084-134312085(+) m6A CDS       24284625//24981863 chr9:134314398-134314399(+) m6A CDS       24284625 chr9:134314437-134314438(+) m6A CDS       24284625 chr9:134314442-134314443(+) Am CDS       - chr9:134319646-134319647(+) m6A CDS       24284625 chr9:134319695-134319696(+) m6A CDS       24284625//22575960 chr9:134321874-134321875(+) m6A CDS       24284625 chr9:134321928-134321929(+) m6A CDS//exon       24284625 chr9:134323140-134323141(+) m6A CDS//exon       22575960 chr9:134323227-134323228(+) m6A exon//intron       22575960 chr9:134323260-134323261(+) m6A exon//intron       22575960 chr9:134323569-134323570(+) m6A exon//intron       22575960 chr9:134330480-134330481(+) m6A CDS       22575960 chr9:134330493-134330494(+) m6A CDS       24284625//24209618//24981863//22575960 chr9:134334552-134334553(+) m6A CDS//intron       24284625//24209618//24981863//22575960 chr9:134334561-134334562(+) m6A CDS//intron       24284625//24209618//24981863//22575960 chr9:134334600-134334601(+) m6A CDS//intron       24284625//24209618//24981863//22575960 chr9:134334620-134334621(+) m6A CDS//intron       24284625//24209618//24981863//22575960 chr9:134334639-134334640(+) m6A CDS//intron       24284625//24209618//22575960 chr9:134334687-134334688(+) m6A CDS//intron       24284625//24209618//22575960 chr9:134340192-134340193(+) m6A CDS       24284625//24209618//25456834//22575960 chr9:134340201-134340202(+) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960 chr9:134340328-134340329(+) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960 chr9:134340342-134340343(+) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960 chr9:134342975-134342976(+) m6A CDS       24284625//24209618//25456834//24981863//22575960 chr9:134346307-134346308(+) m6A CDS       24284625//24981863//22575960 chr9:134346330-134346331(+) m6A CDS       24284625//22575960 chr9:134346340-134346341(+) m6A CDS       24284625//22575960 chr9:134348935-134348936(+) m6A CDS       24284625//22575960 chr9:134348960-134348961(+) m6A CDS       24284625//22575960 chr9:134349098-134349099(+) m6A CDS       24284625 chr9:134349959-134349960(+) m6A CDS//intron       24284625//24981863//22575960//22608085 chr9:134350061-134350062(+) m6A CDS//intron       24284625//24209618//24981863//22575960//22608085 chr9:134350150-134350151(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134350183-134350184(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134350223-134350224(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134350245-134350246(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr9:134350270-134350271(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr9:134350321-134350322(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr9:134350335-134350336(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr9:134350347-134350348(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr9:134350376-134350377(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr9:134350529-134350530(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134350590-134350591(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134350614-134350615(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134350701-134350702(+) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr9:134350874-134350875(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134350915-134350916(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134350944-134350945(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351075-134351076(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351167-134351168(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351270-134351271(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351276-134351277(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351298-134351299(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351333-134351334(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351348-134351349(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351373-134351374(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351402-134351403(+) m6A CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134351496-134351497(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351547-134351548(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351561-134351562(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351609-134351610(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351790-134351791(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134351805-134351806(+) m6A CDS//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134353295-134353296(+) m6A CDS       24284625 chr9:134353313-134353314(+) m6A CDS       24284625 chr9:134353327-134353328(+) m6A CDS       24284625//22575960 chr9:134354755-134354756(+) Gm CDS       - chr9:134357856-134357857(+) m6A CDS       24981863 chr9:134357897-134357898(+) m6A CDS       24981863 chr9:134358104-134358105(+) m6A CDS       24981863 chr9:134358116-134358117(+) m6A CDS       24981863 chr9:134358134-134358135(+) m6A CDS       24981863 chr9:134358140-134358141(+) m6A CDS       24981863 chr9:134358169-134358170(+) m6A CDS       24981863 chr9:134362618-134362619(+) m6A CDS       24284625 chr9:134363400-134363401(+) m6A CDS       24284625 chr9:134363466-134363467(+) m6A CDS       24284625 chr9:134366153-134366154(+) m6A exon//intron       24284625 chr9:134366230-134366231(+) m6A exon//intron       24284625 chr9:134366953-134366954(+) m6A CDS//exon       24284625 chr9:134367599-134367600(+) m6A CDS//exon       24284625 chr9:134367639-134367640(+) m6A CDS//exon       24284625 chr9:134369857-134369858(+) m6A CDS//intron       24284625//22575960 chr9:134371131-134371132(+) m6A CDS//exon       24284625//22575960 chr9:134371149-134371150(+) m6A CDS//exon       24284625//24209618//22575960 chr9:134371210-134371211(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134371375-134371376(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134371383-134371384(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134371472-134371473(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134371724-134371725(+) m6A 3'UTR//exon       24284625//24981863 chr9:134371755-134371756(+) m6A 3'UTR//exon       24284625//24981863 chr9:134372168-134372169(+) m6A 3'UTR//exon       24284625 chr9:134372385-134372386(+) m6A 3'UTR//exon       24284625 chr9:134373377-134373378(+) m6A 3'UTR//exon       24284625//24981863//26404942//22575960//22608085 chr9:134373398-134373399(+) m6A 3'UTR//exon       24284625//24981863//22575960//22608085 chr9:134373481-134373482(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr9:134373493-134373494(+) m6A 3'UTR//exon       24284625//24981863//27773535//22575960//22608085 chr9:134373527-134373528(+) m6A 3'UTR//exon       24284625//24981863 chr9:134373608-134373609(+) m6A 3'UTR//exon       24981863 chr9:134373615-134373616(+) m6A 3'UTR//exon       24981863 chr9:134374395-134374396(+) m6A 3'UTR//exon       24284625//24981863 chr9:134374410-134374411(+) m6A 3'UTR//exon       24284625//24981863 chr9:134374442-134374443(+) m6A 3'UTR//exon       24284625//24981863 chr9:134374519-134374520(+) m6A 3'UTR//exon       24284625 chr9:134374529-134374530(+) m6A 3'UTR//exon       24284625 chr9:134374784-134374785(+) m6A 3'UTR//exon       24284625//24981863//22608085 chr9:134374826-134374827(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134374921-134374922(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134374944-134374945(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:134375042-134375043(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134375192-134375193(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr9:134375334-134375335(+) m6A 3'UTR//exon       24284625//24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PRRC2B	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: PRRC2B

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg