Basic Information:

  VIRBase ID:  

VHID00256869

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          DYNLRB1:  NR_168136     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	DYNLRB1
miRBase Accession/Entrez ID	MIMAT0026552	83658
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BITH//BLP//DNCL2A//DNLC2A//ROBLD1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DYNLRB1	chr20:33126402(+) A-I      intronic chr20:33126403(+) A-I      intronic chr20:33126919(+) A-I      intronic chr20:33107761(+) A-I      intronic chr20:33107755(+) A-I      intronic chr20:33107792(+) A-I      intronic chr20:33126888(+) A-I      intronic chr20:33126901(+) A-I      intronic chr20:33126889(+) A-I      intronic chr20:33126922(+) A-I      intronic chr20:33126893(+) A-I      intronic chr20:33126905(+) A-I      intronic chr20:33126906(+) A-I      intronic chr20:33126381(+) A-I      intronic chr20:33120661(+) A-I      intronic chr20:33120651(+) A-I      intronic chr20:33120626(+) A-I      intronic chr20:33126909(+) A-I      intronic chr20:33126895(+) A-I      intronic chr20:33126898(+) A-I      intronic chr20:33126921(+) A-I      intronic chr20:33126923(+) A-I      intronic chr20:33126920(+) A-I      intronic chr20:33126925(+) A-I      intronic chr20:33126885(+) A-I      intronic chr20:33127440(+) A-I      intronic chr20:33127793(+) A-I      intronic chr20:33107743(+) A-I      intronic chr20:33107714(+) A-I      intronic chr20:33108982(+) A-I      intronic chr20:33127623(+) A-I      intronic chr20:33127467(+) A-I      intronic chr20:33108887(+) A-I      intronic chr20:33109000(+) A-I      intronic chr20:33124339(+) A-I      intronic chr20:33109002(+) A-I      intronic chr20:33109038(+) A-I      intronic chr20:33110345(+) A-I      intronic chr20:33107729(+) A-I      intronic chr20:33108850(+) A-I      intronic chr20:33110555(+) A-I      intronic chr20:33112712(+) A-I      intronic chr20:33112715(+) A-I      intronic chr20:33124279(+) A-I      intronic chr20:33124322(+) A-I      intronic chr20:33127437(+) A-I      intronic chr20:33125993(+) A-I      intronic chr20:33124474(+) A-I      intronic chr20:33124348(+) A-I      intronic chr20:33124455(+) A-I      intronic chr20:33124353(+) A-I      intronic chr20:33124334(+) A-I      intronic chr20:33127452(+) A-I      intronic chr20:33105573(+) A-I      intronic chr20:33105575(+) A-I      intronic chr20:33107307(+) A-I      intronic chr20:33127405(+) A-I      intronic chr20:33127229(+) A-I      intronic chr20:33108895(+) A-I      intronic chr20:33127404(+) A-I      intronic chr20:33126143(+) A-I      intronic chr20:33109746(+) A-I      intronic chr20:33108326(+) A-I      intronic chr20:33127743(+) A-I      intronic chr20:33108844(+) A-I      intronic chr20:33125847(+) A-I      intronic chr20:33105527(+) A-I      intronic chr20:33108959(+) A-I      intronic chr20:33127579(+) A-I      intronic chr20:33107827(+) A-I      intronic chr20:33125903(+) A-I      intronic chr20:33127450(+) A-I      intronic chr20:33127234(+) A-I      intronic chr20:33127356(+) A-I      intronic chr20:33108892(+) A-I      intronic chr20:33127226(+) A-I      intronic chr20:33106718(+) A-I      intronic chr20:33107700(+) A-I      intronic chr20:33107763(+) A-I      intronic chr20:33127494(+) A-I      intronic chr20:33127545(+) A-I      intronic chr20:33107854(+) A-I      intronic chr20:33124429(+) A-I      intronic chr20:33109808(+) A-I      intronic chr20:33105551(+) A-I      intronic chr20:33127491(+) A-I      intronic chr20:33126098(+) A-I      intronic chr20:33127351(+) A-I      intronic chr20:33107789(+) A-I      intronic chr20:33127228(+) A-I      intronic chr20:33112737(+) A-I      intronic chr20:33110381(+) A-I      intronic chr20:33126147(+) A-I      intronic chr20:33126019(+) A-I      intronic chr20:33126137(+) A-I      intronic chr20:33109603(+) A-I      intronic chr20:33127274(+) A-I      intronic chr20:33124428(+) A-I      intronic chr20:33127251(+) A-I      intronic chr20:33127653(+) A-I      intronic chr20:33107814(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DYNLRB1	chr20:33108321(+) A-I intron -    15258596 chr20:33108326(+) A-I intron -    15258596 chr20:33108369(+) A-I intron -    15258596 chr20:33107305(+) T-C intron -    22484847 chr20:33127226(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DYNLRB1	chr20:33104219-33104220(+) m6A 5'UTR//exon       24284625//25456834//24981863//27773535//22608085 chr20:33104231-33104232(+) Y 5'UTR//exon       26075521 chr20:33104267-33104268(+) Tm 5'UTR//intron       - chr20:33104360-33104361(+) m6A 5'UTR//intron       24284625//25456834//24981863//27773535//22608085 chr20:33114087-33114088(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr20:33114139-33114140(+) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//22608085 chr20:33117674-33117675(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr20:33117685-33117686(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr20:33117824-33117825(+) m6A 3'UTR//exon//intron       24981863 chr20:33117833-33117834(+) m6A 3'UTR//exon//intron       25456834//24981863 chr20:33117854-33117855(+) m6A 3'UTR//exon//intron       25456834//24981863 chr20:33117867-33117868(+) m6A 3'UTR//exon//intron       25456834//24981863 chr20:33117872-33117873(+) m6A 3'UTR//exon//intron       25456834//24981863 chr20:33117891-33117892(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863 chr20:33117942-33117943(+) m6A 3'UTR//exon//intron       24284625//25456834//24981863 chr20:33117977-33117978(+) m6A 3'UTR//exon//intron       25456834//24981863 chr20:33122455-33122456(+) m6A CDS//exon       24284625//24981863//27773535//22575960 chr20:33122629-33122630(+) m6A intron       24284625//27773535 chr20:33123366-33123367(+) m6A intron       24284625//24209618 chr20:33128390-33128391(+) m6A CDS//exon       24284625//24209618//27773535//22608085 chr20:33128503-33128504(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22608085 chr20:33128527-33128528(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22608085 chr20:33128589-33128590(+) m6A 3'UTR//exon       24284625//24209618//24981863//26404942//27773535//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DYNLRB1	Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: DYNLRB1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg