Basic Information:

  VIRBase ID:  

VHID00256809

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          BCAN:  NM_198427     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	BCAN
miRBase Accession/Entrez ID	MIMAT0026552	63827
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BEHAB//CSPG7

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BCAN	chr1:156616897(+) A-I      Syn:Ser->Ser

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BCAN	chr1:156611986-156611987(+) m6A 5'UTR       24284625//24209618//24981863//27371828//27773536//22575960 chr1:156612009-156612010(+) m6A 5'UTR       24284625//24209618//24981863//27371828//27773536//22575960 chr1:156612029-156612030(+) m6A 5'UTR       24284625//24209618//24981863//27773536//22575960 chr1:156614891-156614892(+) Tm intron       - chr1:156615928-156615929(+) m6A CDS       24284625//24209618//24981863//22575960 chr1:156616595-156616596(+) m6A CDS//intron       24284625//24209618//24981863//22575960 chr1:156616738-156616739(+) m6A CDS//intron       24284625//24209618//24981863//27371828//22575960 chr1:156617144-156617145(+) m6A CDS//intron       24284625//27773535 chr1:156621451-156621452(+) m6A 3'UTR//CDS       - chr1:156622047-156622048(+) m6A 3'UTR//CDS       - chr1:156622352-156622353(+) m6A 3'UTR//CDS       25456834 chr1:156622365-156622366(+) m6A 3'UTR//CDS       25456834 chr1:156622390-156622391(+) m6A 3'UTR//CDS       25456834 chr1:156622494-156622495(+) m6A CDS       25456834 chr1:156622593-156622594(+) m6A CDS       - chr1:156622608-156622609(+) m6A CDS       - chr1:156622789-156622790(+) m6A 3'UTR//intron       27773535 chr1:156626818-156626819(+) m6A CDS//exon       - chr1:156626871-156626872(+) m6A CDS//exon       - chr1:156626876-156626877(+) m6A CDS//exon       - chr1:156626900-156626901(+) m6A exon//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BCAN	Chromatin HCC cell line (HepG2)|K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleolus HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: BCAN

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg