Basic Information:

  VIRBase ID:  

VHID00256688

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          PDE7B:  NM_018945     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	PDE7B
miRBase Accession/Entrez ID	MIMAT0026552	27115
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA472E5.1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PDE7B	chr6:136277795(+) A-I      intronic chr6:136277797(+) A-I      intronic chr6:136277811(+) A-I      intronic chr6:136277759(+) A-I      intronic chr6:136277787(+) A-I      intronic chr6:136477515(+) A-I      intronic chr6:136370334(+) A-I      intronic chr6:136370310(+) A-I      intronic chr6:136285342(+) A-I      intronic chr6:136478463(+) A-I      intronic chr6:136477593(+) A-I      intronic chr6:136504131(+) A-I      intronic chr6:136478587(+) A-I      intronic chr6:136515941(+) A-I      3'UTR chr6:136515926(+) A-I      3'UTR chr6:136515918(+) A-I      3'UTR chr6:136515922(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PDE7B	chr6:136512826-136512827(+) m6A CDS       - chr6:136512942-136512943(+) m6A CDS       24284625//24981863 chr6:136513252-136513253(+) m6A 3'UTR       24284625//24981863//22575960 chr6:136513310-136513311(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chr6:136513379-136513380(+) m6A 3'UTR       24284625//24981863//22575960 chr6:136513523-136513524(+) m6A 3'UTR       24284625//24981863//22575960 chr6:136513544-136513545(+) m6A 3'UTR       24284625//24981863//22575960 chr6:136513568-136513569(+) m6A 3'UTR       24284625//24981863//22575960 chr6:136513574-136513575(+) m6A 3'UTR       24981863//22575960 chr6:136513627-136513628(+) m6A 3'UTR       24284625//24981863//22575960 chr6:136513652-136513653(+) m6A 3'UTR       24981863//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PDE7B	Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: PDE7B

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg