Basic Information:

  VIRBase ID:  

VHID00256606

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          TRIM31:  NR_134871     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	TRIM31
miRBase Accession/Entrez ID	MIMAT0026552	11074
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C6orf13//HCG1//HCGI//RNF

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TRIM31	chr6:30070691-30070692(-) m6A 3'UTR//exon       27773535 chr6:30070710-30070711(-) m6A 3'UTR//exon       27773535 chr6:30070745-30070746(-) m6A 3'UTR//exon       27773535 chr6:30070751-30070752(-) m6A 3'UTR//exon       27773535 chr6:30070898-30070899(-) m6A 3'UTR//exon       27773535 chr6:30071083-30071084(-) m6A 3'UTR//intron       25456834//24981863//27773535 chr6:30071234-30071235(-) m6A 3'UTR//intron       24981863//27773535 chr6:30071272-30071273(-) m6A 3'UTR//exon       27773535 chr6:30071298-30071299(-) m6A 3'UTR//exon       27773535 chr6:30071719-30071720(-) m6A exon//intron       27773535 chr6:30071905-30071906(-) m6A CDS//exon       24981863 chr6:30071910-30071911(-) m6A CDS//exon       24981863 chr6:30072985-30072986(-) m6A CDS//exon       24981863 chr6:30073018-30073019(-) m6A CDS//exon       24981863 chr6:30073419-30073420(-) m6A exon//intron       27773535 chr6:30075866-30075867(-) m6A CDS//exon       27773535 chr6:30075887-30075888(-) m6A CDS//exon       27773535 chr6:30075899-30075900(-) m6A CDS//exon       27773535 chr6:30076609-30076610(-) m6A exon//intron       27773535 chr6:30078249-30078250(-) m6A CDS//exon       27773535 chr6:30079414-30079415(-) m6A exon//intron       27773535 chr6:30079471-30079472(-) m6A CDS//exon       27773535 chr6:30080410-30080411(-) m6A CDS       27773535 chr6:30080446-30080447(-) m6A CDS       24981863//27773535 chr6:30080507-30080508(-) m6A CDS       24981863//27773535 chr6:30080520-30080521(-) m6A CDS       24981863//27773535 chr6:30080559-30080560(-) m6A CDS       24981863//27773535 chr6:30080600-30080601(-) m6A 5'UTR       24981863//27773535 chr6:30080628-30080629(-) m6A 5'UTR       24981863//27773535 chr6:30080646-30080647(-) m6A 5'UTR       24981863//27773535 chr6:30080662-30080663(-) m6A 5'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TRIM31	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: TRIM31

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg