Basic Information:

  VIRBase ID:  

VHID00256510

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          SLC4A4:  NM_003759     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	SLC4A4
miRBase Accession/Entrez ID	MIMAT0026552	8671
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	hhNMC//HNBC1//KNBC//kNBC1//NBC1//NBC2//NBCe1-A//pNBC//SLC4A5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC4A4	chr4:72062789(+) A-I      intronic chr4:72062722(+) A-I      intronic chr4:72062730(+) A-I      intronic chr4:72062833(+) A-I      intronic chr4:72135861(+) A-I      intronic chr4:72062472(+) A-I      intronic chr4:72159115(+) A-I      intronic chr4:72157226(+) A-I      intronic chr4:72159199(+) A-I      intronic chr4:72135853(+) A-I      intronic chr4:72157274(+) A-I      intronic chr4:72159133(+) A-I      intronic chr4:72159159(+) A-I      intronic chr4:72073588(+) A-I      intronic chr4:72304987(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SLC4A4	chr4:72436592(+) A-I exon 3'UTR    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC4A4	chr4:72205165-72205166(+) m6A CDS//exon       24981863 chr4:72205214-72205215(+) m6A CDS//exon       24981863 chr4:72215655-72215656(+) m6A CDS//exon       24981863 chr4:72316982-72316983(+) m6A CDS//exon       24981863 chr4:72317010-72317011(+) m6A CDS//exon       24981863 chr4:72425900-72425901(+) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC4A4	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: SLC4A4

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg