Basic Information:

  VIRBase ID:  

VHID00256343

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          GYPA:  NM_002099     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	GYPA
miRBase Accession/Entrez ID	MIMAT0026552	2993
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD235a//GPA//GPErik//GPSAT//HGpMiV//HGpMiXI//HGpSta(C)//MN//MNS//PAS-2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GYPA	chr4:145053229(-) A-I      intronic chr4:145037141(-) A-I      intronic chr4:145037124(-) A-I      intronic chr4:145053603(-) A-I      intronic chr4:145037630(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GYPA	chr4:145037186(-) A-I intron -    15258596 chr4:145037630(-) A-I intron -    15258596 chr4:145037672(-) A-I intron -    15258596

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GYPA	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: GYPA

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg