Basic Information:

  VIRBase ID:  

VHID00256272

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL112-5p:  MIMAT0026552          CFTR:  NM_000492     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL112-5p	CFTR
miRBase Accession/Entrez ID	MIMAT0026552	1080
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ABC35//ABCC7//CF//CFTR/MRP//dJ760C5.1//MRP7//TNR-CFTR

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CFTR	chr7:117235755(+) A-I      intronic chr7:117141822(+) A-I      intronic chr7:117141817(+) A-I      intronic chr7:117141694(+) A-I      intronic chr7:117141690(+) A-I      intronic chr7:117235791(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CFTR	chr7:117232149-117232150(+) m6A CDS       24981863 chr7:117232213-117232214(+) m6A CDS       24981863 chr7:117232258-117232259(+) m6A CDS       24981863 chr7:117232264-117232265(+) m6A CDS       24981863 chr7:117232272-117232273(+) m6A CDS       24981863 chr7:117232284-117232285(+) m6A CDS       24981863 chr7:117307079-117307080(+) m6A CDS//intron       - chr7:117307129-117307130(+) m6A CDS//intron       - chr7:117307187-117307188(+) m6A 3'UTR//intron       25456834 chr7:117307217-117307218(+) m6A 3'UTR//intron       25456834 chr7:117307248-117307249(+) m6A 3'UTR//intron       25456834 chr7:117307270-117307271(+) m6A 3'UTR//intron       25456834 chr7:117307304-117307305(+) m6A 3'UTR//intron       - chr7:117307327-117307328(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CFTR	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL112-5p
Interactor2: CFTR

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid
Support Database	VmiReg