Basic Information:

  VIRBase ID:  

VHID00255521

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-3p:  MIMAT0004756          FBXO21:  NM_033624     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-3p	FBXO21
miRBase Accession/Entrez ID	MIMAT0004756	23014
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FBX21

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	FBXO21	chr12:117602193(-) A-I      intronic chr12:117602187(-) A-I      intronic chr12:117620770(-) A-I      intronic chr12:117602178(-) A-I      intronic chr12:117623955(-) A-I      intronic chr12:117623870(-) A-I      intronic chr12:117623864(-) A-I      intronic chr12:117623816(-) A-I      intronic chr12:117623815(-) A-I      intronic chr12:117622530(-) A-I      intronic chr12:117622414(-) A-I      intronic chr12:117622390(-) A-I      intronic chr12:117602260(-) A-I      intronic chr12:117621345(-) A-I      intronic chr12:117621186(-) A-I      intronic chr12:117621176(-) A-I      intronic chr12:117621141(-) A-I      intronic chr12:117620891(-) A-I      intronic chr12:117620167(-) A-I      intronic chr12:117620171(-) A-I      intronic chr12:117622473(-) A-I      intronic chr12:117620094(-) A-I      intronic chr12:117619735(-) A-I      intronic chr12:117619698(-) A-I      intronic chr12:117619578(-) A-I      intronic chr12:117619488(-) A-I      intronic chr12:117618491(-) A-I      intronic chr12:117620618(-) A-I      intronic chr12:117611942(-) A-I      intronic chr12:117611783(-) A-I      intronic chr12:117611731(-) A-I      intronic chr12:117611108(-) A-I      intronic chr12:117611029(-) A-I      intronic chr12:117611015(-) A-I      intronic chr12:117602308(-) A-I      intronic chr12:117602300(-) A-I      intronic chr12:117620496(-) A-I      intronic chr12:117602253(-) A-I      intronic chr12:117602252(-) A-I      intronic chr12:117602190(-) A-I      intronic chr12:117602179(-) A-I      intronic chr12:117602174(-) A-I      intronic chr12:117602139(-) A-I      intronic chr12:117601662(-) A-I      intronic chr12:117601649(-) A-I      intronic chr12:117601219(-) A-I      intronic chr12:117592545(-) A-I      intronic chr12:117592426(-) A-I      intronic chr12:117601603(-) A-I      intronic chr12:117611130(-) A-I      intronic chr12:117621225(-) A-I      intronic chr12:117620195(-) A-I      intronic chr12:117621353(-) A-I      intronic chr12:117601582(-) A-I      intronic chr12:117601255(-) A-I      intronic chr12:117611890(-) A-I      intronic chr12:117602206(-) A-I      intronic chr12:117621088(-) A-I      intronic chr12:117607568(-) A-I      intronic chr12:117621229(-) A-I      intronic chr12:117618542(-) A-I      intronic chr12:117620048(-) A-I      intronic chr12:117620179(-) A-I      intronic chr12:117620288(-) A-I      intronic chr12:117621170(-) A-I      intronic chr12:117598711(-) A-I      intronic chr12:117611776(-) A-I      intronic chr12:117619728(-) A-I      intronic chr12:117620055(-) A-I      intronic chr12:117584899(-) A-I      intronic chr12:117622543(-) A-I      intronic chr12:117592269(-) A-I      intronic chr12:117592315(-) A-I      intronic chr12:117619587(-) A-I      intronic chr12:117620864(-) A-I      intronic chr12:117601324(-) A-I      intronic chr12:117618569(-) A-I      intronic chr12:117590163(-) A-I      intronic chr12:117618710(-) A-I      intronic chr12:117624838(-) A-I      intronic chr12:117623963(-) A-I      intronic chr12:117619517(-) A-I      intronic chr12:117587008(-) A-I      intronic chr12:117611746(-) A-I      intronic chr12:117620258(-) A-I      intronic chr12:117622356(-) A-I      intronic chr12:117611826(-) A-I      intronic chr12:117620133(-) A-I      intronic chr12:117611908(-) A-I      intronic chr12:117621202(-) A-I      intronic chr12:117620506(-) A-I      intronic chr12:117620564(-) A-I      intronic chr12:117609094(-) A-I      intronic chr12:117620081(-) A-I      intronic chr12:117620532(-) A-I      intronic chr12:117620333(-) A-I      intronic chr12:117620815(-) A-I      intronic chr12:117602219(-) A-I      intronic chr12:117601702(-) A-I      intronic chr12:117618633(-) A-I      intronic chr12:117601183(-) A-I      intronic chr12:117618568(-) A-I      intronic chr12:117621193(-) A-I      intronic chr12:117618635(-) A-I      intronic chr12:117622565(-) A-I      intronic chr12:117620505(-) A-I      intronic chr12:117622446(-) A-I      intronic chr12:117602280(-) A-I      intronic chr12:117601746(-) A-I      intronic chr12:117618634(-) A-I      intronic chr12:117601687(-) A-I      intronic chr12:117619569(-) A-I      intronic chr12:117587055(-) A-I      intronic chr12:117607585(-) A-I      intronic chr12:117620451(-) A-I      intronic chr12:117610916(-) A-I      intronic chr12:117602144(-) A-I      intronic chr12:117620816(-) A-I      intronic chr12:117620107(-) A-I      intronic chr12:117620694(-) A-I      intronic chr12:117592437(-) A-I      intronic chr12:117620841(-) A-I      intronic chr12:117601667(-) A-I      intronic chr12:117620758(-) A-I      intronic chr12:117594983(-) A-I      intronic chr12:117622355(-) A-I      intronic chr12:117620586(-) A-I      intronic chr12:117620163(-) A-I      intronic chr12:117601637(-) A-I      intronic chr12:117620175(-) A-I      intronic chr12:117601625(-) A-I      intronic chr12:117619565(-) A-I      intronic chr12:117611904(-) A-I      intronic chr12:117620798(-) A-I      intronic chr12:117600846(-) A-I      intronic chr12:117620782(-) A-I      intronic chr12:117620893(-) A-I      intronic chr12:117622559(-) A-I      intronic chr12:117620851(-) A-I      intronic chr12:117601172(-) A-I      intronic chr12:117622436(-) A-I      intronic chr12:117592311(-) A-I      intronic chr12:117622396(-) A-I      intronic chr12:117620147(-) A-I      intronic chr12:117609068(-) A-I      intronic chr12:117602125(-) A-I      intronic chr12:117620173(-) A-I      intronic chr12:117623938(-) A-I      intronic chr12:117619592(-) A-I      intronic chr12:117607562(-) A-I      intronic chr12:117618594(-) A-I      intronic chr12:117619489(-) A-I      intronic chr12:117620127(-) A-I      intronic chr12:117619688(-) A-I      intronic chr12:117620786(-) A-I      intronic chr12:117620054(-) A-I      intronic chr12:117619484(-) A-I      intronic chr12:117619650(-) A-I      intronic chr12:117620563(-) A-I      intronic chr12:117622475(-) A-I      intronic chr12:117620750(-) A-I      intronic chr12:117601673(-) A-I      intronic chr12:117619599(-) A-I      intronic chr12:117602192(-) A-I      intronic chr12:117601666(-) A-I      intronic chr12:117620051(-) A-I      intronic chr12:117607515(-) A-I      intronic chr12:117620776(-) A-I      intronic chr12:117601627(-) A-I      intronic chr12:117620213(-) A-I      intronic chr12:117602246(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	FBXO21	chr12:117607585(-) A-I intron -    21960545 chr12:117618568(-) A-G intron -    22484847 chr12:117618569(-) A-G intron -    22484847 chr12:117619565(-) A-G intron -    22484847 chr12:117619599(-) A-G intron -    22484847 chr12:117620127(-) A-G intron -    22484847 chr12:117620179(-) A-G intron -    22484847 chr12:117620505(-) A-G intron -    22484847 chr12:117620506(-) A-G intron -    22484847 chr12:117592311(-) A-G intron -    22484847 chr12:117592315(-) A-G intron -    22484847 chr12:117601582(-) A-G intron -    22484847 chr12:117601666(-) A-G intron -    22484847 chr12:117601667(-) A-G intron -    22484847 chr12:117601673(-) A-G intron -    22484847 chr12:117601687(-) A-G intron -    22484847 chr12:117601702(-) A-G intron -    22484847 chr12:117601746(-) A-G intron -    22484847 chr12:117602192(-) A-G intron -    22484847 chr12:117602206(-) A-G intron -    22484847 chr12:117602219(-) A-G intron -    22484847 chr12:117602260(-) A-G intron -    22484847 chr12:117602280(-) A-G intron -    22484847 chr12:117605390(-) T-A intron -    22484847 chr12:117611746(-) A-G intron -    22484847 chr12:117611904(-) A-G intron -    22484847 chr12:117611908(-) A-G intron -    22484847 chr12:117618542(-) A-G intron -    22484847 chr12:117619569(-) A-G intron -    22484847 chr12:117619728(-) A-G intron -    22484847 chr12:117620048(-) A-G intron -    22484847 chr12:117620055(-) A-G intron -    22484847 chr12:117620167(-) A-G intron -    22484847 chr12:117620173(-) A-G intron -    22484847 chr12:117620175(-) A-G intron -    22484847 chr12:117620195(-) A-G intron -    22484847 chr12:117620258(-) A-G intron -    22484847 chr12:117620694(-) A-G intron -    22484847 chr12:117620758(-) A-G intron -    22484847 chr12:117620782(-) A-G intron -    22484847 chr12:117620815(-) A-G intron -    22484847 chr12:117620864(-) A-G intron -    22484847 chr12:117620893(-) A-G intron -    22484847 chr12:117621193(-) A-G intron -    22484847 chr12:117621202(-) A-G intron -    22484847 chr12:117621225(-) A-G intron -    22484847 chr12:117622446(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	FBXO21	chr12:117581154-117581155(-) m6A 3'UTR       27773535 chr12:117581291-117581292(-) m6A 3'UTR       27773535 chr12:117581313-117581314(-) m6A 3'UTR       27773535//22608085 chr12:117581333-117581334(-) m6A 3'UTR       24981863//27773535//22608085 chr12:117581435-117581436(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr12:117581450-117581451(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:117581553-117581554(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:117581587-117581588(-) m6A 3'UTR       24209618//24981863//27773535//22608085 chr12:117581601-117581602(-) m6A 3'UTR       24209618//25456834//24981863//27773535//22608085 chr12:117581699-117581700(-) m6A 3'UTR       27773535 chr12:117581738-117581739(-) m6A 3'UTR       27773535 chr12:117582157-117582158(-) m6A 3'UTR       27773535 chr12:117582817-117582818(-) Y 3'UTR       26075521 chr12:117583437-117583438(-) m6A 3'UTR       27773535 chr12:117583509-117583510(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:117583525-117583526(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr12:117583711-117583712(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr12:117583800-117583801(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr12:117583835-117583836(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr12:117583878-117583879(-) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr12:117583904-117583905(-) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr12:117584078-117584079(-) m6A CDS       24284625//24981863//27773535//22608085 chr12:117595833-117595834(-) m6A CDS       24284625//27773535 chr12:117595840-117595841(-) m6A CDS       24284625//27773535 chr12:117603353-117603354(-) m6A CDS       24284625 chr12:117604723-117604724(-) m6A CDS//intron       - chr12:117627148-117627149(-) m6A CDS//exon       27773536 chr12:117628265-117628266(-) m6A 5'UTR//exon       24209618//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	FBXO21	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells     -

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US33-3p	Panobinostat       6918837 l-685,458       5479543 Crizotinib       11626560 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-3p
Interactor2: FBXO21

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg