Basic Information:

  VIRBase ID:  

VHID00254985

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-US33-3p:  MIMAT0004756          BDH1:  NM_203314     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-US33-3p	BDH1
miRBase Accession/Entrez ID	MIMAT0004756	622
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BDH//SDR9C1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BDH1	chr3:197267171(-) A-I      intronic chr3:197267478(-) A-I      intronic chr3:197267561(-) A-I      intronic chr3:197271755(-) A-I      intronic chr3:197271771(-) A-I      intronic chr3:197271779(-) A-I      intronic chr3:197271810(-) A-I      intronic chr3:197266974(-) A-I      intronic chr3:197290824(-) A-I      intronic chr3:197290825(-) A-I      intronic chr3:197290861(-) A-I      intronic chr3:197290873(-) A-I      intronic chr3:197269625(-) A-I      intronic chr3:197267458(-) A-I      intronic chr3:197266149(-) A-I      intronic chr3:197266206(-) A-I      intronic chr3:197284431(-) A-I      intronic chr3:197284502(-) A-I      intronic chr3:197264063(-) A-I      intronic chr3:197290238(-) A-I      intronic chr3:197289144(-) A-I      intronic chr3:197284505(-) A-I      intronic chr3:197284512(-) A-I      intronic chr3:197279992(-) A-I      intronic chr3:197263486(-) A-I      intronic chr3:197263605(-) A-I      intronic chr3:197279926(-) A-I      intronic chr3:197279824(-) A-I      intronic chr3:197271811(-) A-I      intronic chr3:197294173(-) A-I      intronic chr3:197263893(-) A-I      intronic chr3:197263449(-) A-I      intronic chr3:197262913(-) A-I      intronic chr3:197294201(-) A-I      intronic chr3:197284536(-) A-I      intronic chr3:197284541(-) A-I      intronic chr3:197284544(-) A-I      intronic chr3:197294212(-) A-I      intronic chr3:197294221(-) A-I      intronic chr3:197280002(-) A-I      intronic chr3:197289158(-) A-I      intronic chr3:197289134(-) A-I      intronic chr3:197294224(-) A-I      intronic chr3:197262911(-) A-I      intronic chr3:197280021(-) A-I      intronic chr3:197263657(-) A-I      intronic chr3:197265288(-) A-I      intronic chr3:197265398(-) A-I      intronic chr3:197266193(-) A-I      intronic chr3:197280260(-) A-I      intronic chr3:197280288(-) A-I      intronic chr3:197279982(-) A-I      intronic chr3:197279971(-) A-I      intronic chr3:197267096(-) A-I      intronic chr3:197267065(-) A-I      intronic chr3:197289125(-) A-I      intronic chr3:197280300(-) A-I      intronic chr3:197280317(-) A-I      intronic chr3:197280397(-) A-I      intronic chr3:197266214(-) A-I      intronic chr3:197266227(-) A-I      intronic chr3:197264053(-) A-I      intronic chr3:197264038(-) A-I      intronic chr3:197263969(-) A-I      intronic chr3:197263943(-) A-I      intronic chr3:197266238(-) A-I      intronic chr3:197266250(-) A-I      intronic chr3:197267033(-) A-I      intronic chr3:197237990(-) A-I      3'UTR chr3:197237989(-) A-I      3'UTR chr3:197237976(-) A-I      3'UTR chr3:197269558(-) A-I      intronic chr3:197271836(-) A-I      intronic chr3:197271675(-) A-I      intronic chr3:197265487(-) A-I      intronic chr3:197267018(-) A-I      intronic chr3:197263614(-) A-I      intronic chr3:197265399(-) A-I      intronic chr3:197263555(-) A-I      intronic chr3:197263988(-) A-I      intronic chr3:197269533(-) A-I      intronic chr3:197265351(-) A-I      intronic chr3:197262805(-) A-I      intronic chr3:197265319(-) A-I      intronic chr3:197279827(-) A-I      intronic chr3:197265393(-) A-I      intronic chr3:197290921(-) A-I      intronic chr3:197279821(-) A-I      intronic chr3:197267102(-) A-I      intronic chr3:197267416(-) A-I      intronic chr3:197290942(-) A-I      intronic chr3:197266989(-) A-I      intronic chr3:197262695(-) A-I      intronic chr3:197271837(-) A-I      intronic chr3:197267073(-) A-I      intronic chr3:197271819(-) A-I      intronic chr3:197265347(-) A-I      intronic chr3:197271832(-) A-I      intronic chr3:197267059(-) A-I      intronic chr3:197267027(-) A-I      intronic chr3:197263925(-) A-I      intronic chr3:197267306(-) A-I      intronic chr3:197266131(-) A-I      intronic chr3:197267477(-) A-I      intronic chr3:197264036(-) A-I      intronic chr3:197265469(-) A-I      intronic chr3:197267440(-) A-I      intronic chr3:197267197(-) A-I      intronic chr3:197265257(-) A-I      intronic chr3:197263495(-) A-I      intronic chr3:197265402(-) A-I      intronic chr3:197263902(-) A-I      intronic chr3:197264061(-) A-I      intronic chr3:197267494(-) A-I      intronic chr3:197269566(-) A-I      intronic chr3:197262694(-) A-I      intronic chr3:197262704(-) A-I      intronic chr3:197267284(-) A-I      intronic chr3:197269596(-) A-I      intronic chr3:197263922(-) A-I      intronic chr3:197267296(-) A-I      intronic chr3:197263967(-) A-I      intronic chr3:197267335(-) A-I      intronic chr3:197272842(-) A-I      intronic chr3:197262659(-) A-I      intronic chr3:197264124(-) A-I      intronic chr3:197266994(-) A-I      intronic chr3:197262711(-) A-I      intronic chr3:197265426(-) A-I      intronic chr3:197290781(-) A-I      intronic chr3:197271797(-) A-I      intronic chr3:197263968(-) A-I      intronic chr3:197263932(-) A-I      intronic chr3:197263711(-) A-I      intronic chr3:197266148(-) A-I      intronic chr3:197237880(-) A-I      3'UTR chr3:197237970(-) A-I      3'UTR chr3:197237906(-) A-I      3'UTR chr3:197272896(-) A-I      intronic chr3:197262767(-) A-I      intronic chr3:197263701(-) A-I      intronic chr3:197267060(-) A-I      intronic chr3:197262698(-) A-I      intronic chr3:197267323(-) A-I      intronic chr3:197262671(-) A-I      intronic chr3:197262733(-) A-I      intronic chr3:197280313(-) A-I      intronic chr3:197263592(-) A-I      intronic chr3:197266290(-) A-I      intronic chr3:197265299(-) A-I      intronic chr3:197262768(-) A-I      intronic chr3:197290886(-) A-I      intronic chr3:197263632(-) A-I      intronic chr3:197262854(-) A-I      intronic chr3:197265427(-) A-I      intronic chr3:197262794(-) A-I      intronic chr3:197263949(-) A-I      intronic chr3:197267536(-) A-I      intronic chr3:197263998(-) A-I      intronic chr3:197267348(-) A-I      intronic chr3:197263602(-) A-I      intronic chr3:197264097(-) A-I      intronic chr3:197290890(-) A-I      intronic chr3:197262792(-) A-I      intronic chr3:197267275(-) A-I      intronic chr3:197290891(-) A-I      intronic chr3:197262870(-) A-I      intronic chr3:197267095(-) A-I      intronic chr3:197299605(-) A-I      intronic chr3:197263957(-) A-I      intronic chr3:197271833(-) A-I      intronic chr3:197263927(-) A-I      intronic chr3:197267428(-) A-I      intronic chr3:197264039(-) A-I      intronic chr3:197265361(-) A-I      intronic chr3:197265401(-) A-I      intronic chr3:197263675(-) A-I      intronic chr3:197264078(-) A-I      intronic chr3:197264133(-) A-I      intronic chr3:197269606(-) A-I      intronic chr3:197267093(-) A-I      intronic chr3:197265460(-) A-I      intronic chr3:197290846(-) A-I      intronic chr3:197266998(-) A-I      intronic chr3:197263688(-) A-I      intronic chr3:197264037(-) A-I      intronic chr3:197262915(-) A-I      intronic chr3:197290807(-) A-I      intronic chr3:197264079(-) A-I      intronic chr3:197299525(-) A-I      intronic chr3:197267504(-) A-I      intronic chr3:197265290(-) A-I      intronic chr3:197263713(-) A-I      intronic chr3:197265396(-) A-I      intronic chr3:197242693(-) A-I      intronic chr3:197271752(-) A-I      intronic chr3:197290728(-) A-I      intronic chr3:197267100(-) A-I      intronic chr3:197262865(-) A-I      intronic chr3:197264103(-) A-I      intronic chr3:197262835(-) A-I      intronic chr3:197264033(-) A-I      intronic chr3:197269500(-) A-I      intronic chr3:197267496(-) A-I      intronic chr3:197264146(-) A-I      intronic chr3:197264132(-) A-I      intronic chr3:197263455(-) A-I      intronic chr3:197263507(-) A-I      intronic chr3:197263889(-) A-I      intronic chr3:197267019(-) A-I      intronic chr3:197269630(-) A-I      intronic chr3:197267322(-) A-I      intronic chr3:197269665(-) A-I      intronic chr3:197267483(-) A-I      intronic chr3:197264024(-) A-I      intronic chr3:197265334(-) A-I      intronic chr3:197263549(-) A-I      intronic chr3:197271856(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BDH1	chr3:197290728(-) A-I intron -    15258596 chr3:197290781(-) A-I intron -    15258596 chr3:197290807(-) A-I intron -    15258596 chr3:197290846(-) A-I intron -    15258596 chr3:197290886(-) A-I intron -    15258596 chr3:197290887(-) A-I intron -    15258596 chr3:197290890(-) A-I intron -    15258596 chr3:197290891(-) A-I intron -    15258596 chr3:197290921(-) A-I intron -    15258596 chr3:197290928(-) A-I intron -    15258596 chr3:197290929(-) A-I intron -    15258596 chr3:197290935(-) A-I intron -    15258596 chr3:197290942(-) A-I intron -    15258596 chr3:197290963(-) A-I intron -    15258596 chr3:197263998(-) A-I intron -    22327324 chr3:197263967(-) A-I intron -    21960545 chr3:197264037(-) A-I intron -    21960545 chr3:197262681(-) A-G intron -    22484847 chr3:197262686(-) A-G intron -    22484847 chr3:197262694(-) A-G intron -    22484847 chr3:197262695(-) A-G intron -    22484847 chr3:197262698(-) A-G intron -    22484847 chr3:197262835(-) A-G intron -    22484847 chr3:197262865(-) A-G intron -    22484847 chr3:197262870(-) A-G intron -    22484847 chr3:197262879(-) A-G intron -    22484847 chr3:197262899(-) A-G intron -    22484847 chr3:197263455(-) A-G intron -    22484847 chr3:197263468(-) A-G intron -    22484847 chr3:197263495(-) A-G intron -    22484847 chr3:197263520(-) A-G intron -    22484847 chr3:197263549(-) A-G intron -    22484847 chr3:197263555(-) A-G intron -    22484847 chr3:197263590(-) A-G intron -    22484847 chr3:197263614(-) A-G intron -    22484847 chr3:197263631(-) A-G intron -    22484847 chr3:197263632(-) A-G intron -    22484847 chr3:197263688(-) A-G intron -    22484847 chr3:197263711(-) A-G intron -    22484847 chr3:197263902(-) A-G intron -    22484847 chr3:197263925(-) A-G intron -    22484847 chr3:197263967(-) A-G intron -    22484847 chr3:197263988(-) A-G intron -    22484847 chr3:197263998(-) A-G intron -    22484847 chr3:197264024(-) A-T intron -    22484847 chr3:197264037(-) A-G intron -    22484847 chr3:197264078(-) A-G intron -    22484847 chr3:197264079(-) A-G intron -    22484847 chr3:197264097(-) A-G intron -    22484847 chr3:197264132(-) A-G intron -    22484847 chr3:197264146(-) A-G intron -    22484847 chr3:197265295(-) A-G intron -    22484847 chr3:197265299(-) A-G intron -    22484847 chr3:197265400(-) A-G intron -    22484847 chr3:197265405(-) A-G intron -    22484847 chr3:197266175(-) A-G intron -    22484847 chr3:197266207(-) A-G intron -    22484847 chr3:197266290(-) A-G intron -    22484847 chr3:197267018(-) A-G intron -    22484847 chr3:197267095(-) A-G intron -    22484847 chr3:197267377(-) A-G intron -    22484847 chr3:197267477(-) A-G intron -    22484847 chr3:197267483(-) A-G intron -    22484847 chr3:197267504(-) A-G intron -    22484847 chr3:197269532(-) A-G intron -    22484847 chr3:197269533(-) A-G intron -    22484847 chr3:197271752(-) A-G intron -    22484847 chr3:197271797(-) A-G intron -    22484847 chr3:197271819(-) A-G intron -    22484847 chr3:197271836(-) A-G intron -    22484847 chr3:197272842(-) A-G intron -    22484847 chr3:197272913(-) A-G intron -    22484847 chr3:197280313(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BDH1	chr3:197236745-197236746(-) m6A 3'UTR       25456834 chr3:197236819-197236820(-) m6A 3'UTR       25456834 chr3:197236877-197236878(-) m6A 3'UTR       25456834 chr3:197237050-197237051(-) m6A 3'UTR       25456834 chr3:197237078-197237079(-) m6A 3'UTR       25456834 chr3:197237085-197237086(-) m6A 3'UTR       25456834 chr3:197237146-197237147(-) m6A 3'UTR       25456834 chr3:197237203-197237204(-) m6A 3'UTR       25456834 chr3:197237232-197237233(-) m6A 3'UTR       25456834 chr3:197238284-197238285(-) m6A 3'UTR       - chr3:197238421-197238422(-) m6A 3'UTR       27773535 chr3:197238465-197238466(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr3:197238482-197238483(-) m6A 3'UTR       25456834//24981863//27773535//22608085 chr3:197238534-197238535(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr3:197238579-197238580(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr3:197238651-197238652(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:197238707-197238708(-) m6A 3'UTR       24284625//25456834//24981863//27371828//22608085 chr3:197238841-197238842(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27371828//22608085 chr3:197238916-197238917(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr3:197238941-197238942(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr3:197238985-197238986(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr3:197239138-197239139(-) m6A CDS//exon       24284625//24209618//25456834//27371828//22608085 chr3:197242323-197242324(-) m1A exon//intron       26863196 chr3:197265637-197265638(-) m6A exon//intron       - chr3:197265670-197265671(-) m6A exon//intron       24981863 chr3:197265694-197265695(-) m6A exon//intron       24209618//24981863 chr3:197265707-197265708(-) m6A exon//intron       24209618//24981863 chr3:197265724-197265725(-) m6A exon//intron       24284625//24209618//24981863//27371828 chr3:197265794-197265795(-) m6A exon//intron       24284625//24981863//27371828 chr3:197273342-197273343(-) m6A 5'UTR//exon//intron       27371828 chr3:197282222-197282223(-) m6A 5'UTR//exon//intron       25456834 chr3:197282263-197282264(-) m6A 5'UTR//exon//intron       25456834 chr3:197282287-197282288(-) m6A 5'UTR//exon//intron       25456834 chr3:197282773-197282774(-) m6A 5'UTR//exon//intron       27371828

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BDH1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Related Drug Information:

Resource	Symbol	Drug Name	PubChem ID
RNAactDrug	hcmv-miR-US33-3p	Panobinostat       6918837 l-685,458       5479543 Crizotinib       11626560 Pha-665752       10461815

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-US33-3p
Interactor2: BDH1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA
Support Database	RepTar//VmiReg