Basic Information:

  VIRBase ID:  

VHID00254018

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-3p:  MIMAT0004754          ISCA2:  NM_001272007     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-3p	ISCA2
miRBase Accession/Entrez ID	MIMAT0004754	122961
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	c14_5557//HBLD1//ISA2//MMDS4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ISCA2	chr14:74960841-74960842(+) m6A CDS//exon       - chr14:74961537-74961538(+) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//22608085 chr14:74961602-74961603(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22608085 chr14:74961615-74961616(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22608085 chr14:74961644-74961645(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//22608085 chr14:74961696-74961697(+) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//22608085 chr14:74961753-74961754(+) m6A 3'UTR       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ISCA2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HCC cell line (HepG2)     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-3p
Interactor2: ISCA2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg