Basic Information:

  VIRBase ID:  

VHID00252684

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-3p:  MIMAT0004754          TIPARP:  NM_001184717     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-3p	TIPARP
miRBase Accession/Entrez ID	MIMAT0004754	25976
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARTD14//PARP7//pART14

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TIPARP	chr3:156405939(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TIPARP	chr3:156402489(+) A-G intron -    22484847 chr3:156413228(+) G-A intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TIPARP	chr3:156392408-156392409(+) m6A 5'UTR//intron       24981863 chr3:156392726-156392727(+) m6A 5'UTR//intron       24284625 chr3:156393551-156393552(+) m6A 5'UTR//intron       - chr3:156395454-156395455(+) m6A 5'UTR       24284625//24981863//22575960//22608085 chr3:156395498-156395499(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr3:156395506-156395507(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr3:156395517-156395518(+) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085 chr3:156395569-156395570(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr3:156395597-156395598(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:156395633-156395634(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:156395639-156395640(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:156395667-156395668(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:156395715-156395716(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156395733-156395734(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156395746-156395747(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156395828-156395829(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156395841-156395842(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156395921-156395922(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr3:156395966-156395967(+) m6A CDS       24284625//25456834//24981863//27773535//22575960//22608085 chr3:156396021-156396022(+) m6A CDS       24284625//24981863//26404942//27773535//22575960//22608085 chr3:156396060-156396061(+) m6A CDS       24284625//24981863//26404942//27773535//22575960//22608085 chr3:156396087-156396088(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156396123-156396124(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156396168-156396169(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156396219-156396220(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156396302-156396303(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156398959-156398960(+) m6A CDS//intron       24284625//24981863//27773535//22575960//22608085 chr3:156411811-156411812(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr3:156411854-156411855(+) m6A CDS       27773535 chr3:156413772-156413773(+) m6A CDS       27773535 chr3:156421304-156421305(+) m6A CDS       24284625//24981863//22608085 chr3:156421318-156421319(+) m6A CDS       24284625//24981863//22608085 chr3:156421346-156421347(+) m6A CDS       24284625//24981863//27773535//22608085 chr3:156421414-156421415(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr3:156421463-156421464(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chr3:156422489-156422490(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr3:156422529-156422530(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr3:156422545-156422546(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr3:156422577-156422578(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156422625-156422626(+) m6A CDS       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr3:156422953-156422954(+) m6A 3'UTR       27773535 chr3:156422992-156422993(+) m6A 3'UTR       27773535 chr3:156423004-156423005(+) m6A 3'UTR       27773535 chr3:156423014-156423015(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TIPARP	Chromatin K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-3p
Interactor2: TIPARP

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg