Basic Information:

  VIRBase ID:  

VHID00251204

  Virus:  

Human betaherpesvirus 5 (HHV-5)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hcmv-miR-UL36-3p:  MIMAT0004754          HCCS:  NM_005333     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hcmv-miR-UL36-3p	HCCS
miRBase Accession/Entrez ID	MIMAT0004754	3052
Organism	Human betaherpesvirus 5 (HHV-5)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CCHL//LSDMCA1//MCOPS7//MLS

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HCCS	chrX:11129559-11129560(+) m6A 5'UTR//intron       24209618//25456834//24981863//22575960 chrX:11129621-11129622(+) m6A 5'UTR//intron       24209618//24981863//22575960 chrX:11139832-11139833(+) m6A CDS       24981863//27773535//22608085 chrX:11139892-11139893(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chrX:11139921-11139922(+) m6A CDS       24284625//24981863//27773535//22575960//22608085 chrX:11139957-11139958(+) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chrX:11139984-11139985(+) m6A 3'UTR       24981863//22608085 chrX:11140026-11140027(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HCCS	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hcmv-miR-UL36-3p
Interactor2: HCCS

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg